Gene Information

Name : Pat9b_4218 (Pat9b_4218)
Accession : YP_004119338.1
Strain :
Genome accession: NC_014841
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 91803 - 94094 bp
Length : 2292 bp
Strand : +
Note : KEGG: esa:ESA_01552 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug

DNA sequence :
ATGTCTCACTTAATTGGAAAAAGGAAAACGACCCTGTCATTACTGATTGGGCTGGTCATCCACAGTGGCTACTCTCTGGC
AGCCGAAACACCAACGAATGTTTTATCGTTACAGGAGCAGGAGGCGGTAACCAAAACGACCTCTGACACCGCAAAGAAAA
CCACCACTGCACCGACGGTCAATCCGACCAACGAAGACACCATGGTGGTGTCGGCCAAAGCCGAAGAGAAACTTAAGCAA
CAGCCTGGCGCATCGCTGATCACCAAAGAAGACCTCGAACGCAACCCACCGGTTAACGACCTGTCCGAAATCATTCGCAA
GATGCCGGGTGTGAATTTAACCGGCAACAGTGCGACCGGAAGTCGTGGCAACAACCGCCAGATTGATATTCGCGGTATGG
GGCCGGAAAACACCCTGATCCTGATTGATGGCGTGCCGGTATCTTCGCGCAGCTCTGTACGTTACAGCCGTACCGGCGAG
CGAGACACCCGTGGCGACAGCAACTGGGTGCCACCGGAGATGGTGGATCATATCGATGTGTTACGTGGCCCGGCTGCTGC
GCACTATGGCTCCGGGGCGATGGGCGGGGTGGTGAATATCGTCACCAAACGCCCGACGAACGACTGGCATGGCTCGTTAT
CGCTCTACACCAACCAACCGGAAGACAAGGATGAAGGTGCGACCAAACGCATGAACTTCAGCCTGAGCGGCCCGCTGATC
GATGATGTGCTGACCATGCGCCTGTATGGCAACATCAACAAGACGGACGCTGACGCCTACGATATCAACACCAACGAAAA
CGGTTCTTATGCGGCGGGTCGCGAAGGGGTGCGCAACCGCGATATCAACACCGCAGTACAGTGGAAGATCAATCCGCAGC
AGTACATGGATTTTAACTACGCTTACAGTCGGCAGGGCAATATCTATGCTGGTGATACCCAGTACAGCAACAGCAACCTG
AGTACCCTGGTACCGACCTTATACGGTCAGGAAACCAACCGTATGTACCGCCAGTCCTACAGCGTGACCCATAACGGCAT
CTGGGACTGGGGCCAGTCAAAACTGACTCTGAGTTATGAAGACACCCACAACACCCGTCTGGATGAAGGTTCAACCGGTA
AAGTGGAAGGGATGATCAACAGCGACACCTATAACACCAGCCGTTATAAAACCTGGCGCGTCAATAATGAGTACACCATT
CCCTTCACCCTGCTGGTGGATAACACCCTGACGCTCGGCGGTGAATGGAATAAGGAACAGCTGAACGATCCGGCATCGAT
GCAGGAAACGGACGCGACCGGCATTGATATCAACGGTGTATCCGGCGATCCGTCGCAGCGCAGCAGCAAAAACAGCCAGG
AGCTGAGCGCCATTTACCTGGAAGACACCATTGATGCCTTCGACTCCACCACGCTGATCCCGGGGCTGCGTTTTGACTAC
AGCGATCGCTTTGGCAGCAACTGGAGCCCGAGCCTGAACATTCAGCAGGAGTTGGGTGATCACCTTACACTGAAAGCCGG
TATTGCCCGTGTGTTCAAAGCACCCAACCTGTATCAGTCCAGTGAAGGTTATCTGCTGGCAAGCAGTGGCAACGGTTGTA
ACGTTGGAGGCAGCAACGGCTGTTATCTGATGGGTAATAGCGATCTGAAACCTGAAATCAGCGTTAACAAAGAGGTTGGG
CTGCAATGGACTGATGAAGGTTACAGCGCGGGCCTGACTTATTTCCGCAACGATTATCAGAATAAGATCGTGGCCGGCGA
CACGTCTCTGGGAACGGTGAATGTAGCCAGCTCCTGGTATTCATCAACCTATGATATTTATCAGTGGCAGAATGGTGGCA
AGGCGCTGACTCAGGGTCTTGAGGCCAACCTGACCATCCCGCTGGTGGAAGACACCCTGAACTGGCGTACCAATGCGACT
TATATGTTTACCTCGAAATATAAGTCGACCGGGAATCCACTCTCTCTGATCCCGAAATACACGGTGAACAGTTGGCTGGA
CTGGCAGATGACCGATGCACTGTCCGCCACCCTGAGCTGGACGATGTATGGTCGCCAGCATCCGCGTACCACAGCTGAAA
TCCGTAAGGAAGCCAGCGGGTTGTCGGAAAATGAGGTGGGTGCCTACGCCATCTTTGGTACCGGACTGAACTATCAGTAC
AACAAAAACCTGCGTTTCAACGTCGGTATCAGCAACCTGCTGAACAAGCAAATCTATCGTGAAAACGAAGGGGCTTCGAC
CTACAACGAGCCAGGCCGCGCGTATTATGCGGGTGTGACCACCTCGTTCTGA

Protein sequence :
MSHLIGKRKTTLSLLIGLVIHSGYSLAAETPTNVLSLQEQEAVTKTTSDTAKKTTTAPTVNPTNEDTMVVSAKAEEKLKQ
QPGASLITKEDLERNPPVNDLSEIIRKMPGVNLTGNSATGSRGNNRQIDIRGMGPENTLILIDGVPVSSRSSVRYSRTGE
RDTRGDSNWVPPEMVDHIDVLRGPAAAHYGSGAMGGVVNIVTKRPTNDWHGSLSLYTNQPEDKDEGATKRMNFSLSGPLI
DDVLTMRLYGNINKTDADAYDINTNENGSYAAGREGVRNRDINTAVQWKINPQQYMDFNYAYSRQGNIYAGDTQYSNSNL
STLVPTLYGQETNRMYRQSYSVTHNGIWDWGQSKLTLSYEDTHNTRLDEGSTGKVEGMINSDTYNTSRYKTWRVNNEYTI
PFTLLVDNTLTLGGEWNKEQLNDPASMQETDATGIDINGVSGDPSQRSSKNSQELSAIYLEDTIDAFDSTTLIPGLRFDY
SDRFGSNWSPSLNIQQELGDHLTLKAGIARVFKAPNLYQSSEGYLLASSGNGCNVGGSNGCYLMGNSDLKPEISVNKEVG
LQWTDEGYSAGLTYFRNDYQNKIVAGDTSLGTVNVASSWYSSTYDIYQWQNGGKALTQGLEANLTIPLVEDTLNWRTNAT
YMFTSKYKSTGNPLSLIPKYTVNSWLDWQMTDALSATLSWTMYGRQHPRTTAEIRKEASGLSENEVGAYAIFGTGLNYQY
NKNLRFNVGISNLLNKQIYRENEGASTYNEPGRAYYAGVTTSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_4218 YP_004119338.1 TonB-dependent siderophore receptor VFG1650 Protein 0.0 64
Pat9b_4218 YP_004119338.1 TonB-dependent siderophore receptor VFG0935 Protein 0.0 64
Pat9b_4218 YP_004119338.1 TonB-dependent siderophore receptor VFG0923 Protein 5e-134 49