Gene Information

Name : Alide_2168 (Alide_2168)
Accession : YP_004126794.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2217902 - 2218843 bp
Length : 942 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_1721 transcriptional regulator CysB-like protein

DNA sequence :
ATGAACCTGCACCAGTTCCGCTTCGTCCAGGAGGCCGCCCGCCGCAACCTCAACCTGACCGAGGCCGCCAAGGCGCTGCA
CACCTCGCAGCCGGGGGTCTCCAAGGCCATCATCGAGCTGGAGGACGAGCTGGGCGTGGACATCTTCGCGCGCCACGGCA
AGCGCCTCAAGCGCGTGACCGAGCCCGGCCAGCACGTGCTCAGGAGCATCGAGCTCATCATGCGCGAAGTGGGCAACCTC
AAGCGCATCGGCGAGCAGTACAGCGCGCAGGACAGCGGCACGCTGGCCATCGCCACCACCCACACCCAGGCGCGCTACGT
GCTGCCCGTGCCCGTGGCTAAGCTGCGCGAGGCCTACCCGAAGGTCAACATCAGCCTGCACCAGGCCACGCCGCACGAGG
TGGCGCGCATGGTGATTGACGAAGTGGCCGAGATCGGCATGGCCACGGAGTCGCTGGCCGACTACCCCGACCTCGTCACC
CTGCCCTGCTACGAATGGCAGCACGTGCTGGTGCTGCCGCCCAGCCACCCGCTGGCGCAGAAGGAACGCGTGGGCCTGGA
CGACATCGCGCACGAGGCGCTCATCACCTACCACCCCTCGTTCACCGGCCGCGGCAAGATTGACCAGGCCTTCGCCACGC
GCAAGCTGCAGCCGCGCATCGTGCTGGAGGCCATCGACTCCGACGTGATCAAGACCTACGTGCGCCTGGGCCTGGGCATA
GGCATCGTGGCCGAGATGGCCGTGCGCGACGACCCGCTGGGCGATCTCGTCGTGCGCCCCATGGGCCACCTGTTCGGCCA
GAGCGTGGCGCGCGTGGCGTTCAAGCGCGGCGCCTACCTGCGCAACTTCGTCTACAAATTCGCCGAACTGCTGAGCGACC
GTCTGAGCCGCGACCTGATCGCCCGTGCCATGACCGGGCACGTGCACGACTATGAGCTGTGA

Protein sequence :
MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEDELGVDIFARHGKRLKRVTEPGQHVLRSIELIMREVGNL
KRIGEQYSAQDSGTLAIATTHTQARYVLPVPVAKLREAYPKVNISLHQATPHEVARMVIDEVAEIGMATESLADYPDLVT
LPCYEWQHVLVLPPSHPLAQKERVGLDDIAHEALITYHPSFTGRGKIDQAFATRKLQPRIVLEAIDSDVIKTYVRLGLGI
GIVAEMAVRDDPLGDLVVRPMGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLSRDLIARAMTGHVHDYEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 4e-64 46