Gene Information

Name : Alide_2374 (Alide_2374)
Accession : YP_004126996.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2438614 - 2439492 bp
Length : 879 bp
Strand : +
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_1453 LysR family transcriptional regulator

DNA sequence : 
GTGATCCCACCGCTCAGCGCCCTCCAGGCCTTCGAGGCCGTCGCCCGCCGCCGCAGCTTTTCCCTGGCGGCCACCGAACT
GCACCTGACCCCCTCGGCCATCAGCCACCAGCTGGCCAAGCTGGAAAACCTGCTCGGCGTGCGGCTGTTCGAGCGCTCGT
CGCGGGGCGTGGACCTGACGCCCGCGGGCCACAGCTACCTGCAGCGCGTGGGCAATGCGCTGGGGGCCATCAGCACGGCG
ACCGACGCCCTGCGGCACGGCGTGCAGGACTCGCTGTACCTGCACTGCAGCCCGAGTTTCGCGAGCCTGTGGCTCATGCC
GCGCATCGCGCGCTTCGCTCAGCGCAACCCGGGGATCTCGCTGGTGCTGTCGGCCTCGCACGTGCATTCGGACTTCCAGC
TCGGCCTCGTGGACCTGGACATCCGCTACGGGCTGCCCACCTGGCCGCACCTGGAGGTCGAGCCCATCTTCTCCGAGAAG
GTGCTGCCGCTCGCGAGCCCCGAGTTCATCCGCCGCCACGCCCTGCACACGCCGCAGGACCTGCTGCAGGTGCCGCTGAT
CCAGTCCATGATCAACGTCGCGCAATGGCCGGAATGGTTCGCCCGCTTCGAGCCCGCGCACCGGCCGGAGCGCATCGCCC
TGAAGTTCGACCGGGCCATGATGAGCCTGGACGCGGCCGTCCAGTCGCTGGGCGTAGCGCTGGAGAGCGCCTGCCTGGGA
CAGGCACACATCGCCAGCGGCCGGCTGCAGCCCGTGTTCGGCGACGAGATGAGCCTGGAGGTGCAGGCCCATTTCCTCGT
GTACCCGGCGCGCCATGCCGCGCGGCCGGAGGTGAGGATGTTCCTCGACTGGATCCGCGAGGAAGCCAGGGCCTGTTGA

Protein sequence : 
MIPPLSALQAFEAVARRRSFSLAATELHLTPSAISHQLAKLENLLGVRLFERSSRGVDLTPAGHSYLQRVGNALGAISTA
TDALRHGVQDSLYLHCSPSFASLWLMPRIARFAQRNPGISLVLSASHVHSDFQLGLVDLDIRYGLPTWPHLEVEPIFSEK
VLPLASPEFIRRHALHTPQDLLQVPLIQSMINVAQWPEWFARFEPAHRPERIALKFDRAMMSLDAAVQSLGVALESACLG
QAHIASGRLQPVFGDEMSLEVQAHFLVYPARHAARPEVRMFLDWIREEARAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96226.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-47 45
unnamed AAT96174.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-47 45
unnamed AAT96114.1 lysR family transcriptional regulator Not tested T-PAI Protein 7e-48 45
unnamed AAT96097.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-47 45
unnamed AAT96053.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-47 45