Gene Information

Name : Alide_0286 (Alide_0286)
Accession : YP_004124955.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 318761 - 319999 bp
Length : 1239 bp
Strand : +
Note : PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ajs:Ajs_0168 glycolate oxidase iron-sulfur subunit

DNA sequence :
ATGCAGACCCAACTCGCTCCAGAATACCAGGGCACGCCCGAAGGCCAGGAGGCCGAGGCCATCCTGCGCAAATGCGTGCA
CTGCGGCTTTTGCACCGCCACCTGCCCCACCTACCAGCTGCTGGGCGACGAGCTCGACGGTCCGCGCGGGCGCATCTACC
TCATCAAGCAGGTGCTGGAAGGCCAGGAGCCCACGCGCAAGACCCAGCTGCACCTGGACCGCTGCCTGACCTGCCGCAAC
TGCGAGAGCACCTGCCCCAGCGGCGTGCAGTACGGCCACCTGGTGGACATAGGCCGGCGCATCGTCGAGGAAAAGGTGCC
CCGCCCGCGCGGCGAGGCCGCGGTGCGCTGGGCGCTCAAGGAGGGGCTGCCCTCGCCGCTGTTCGCGCCCGCCATGAAGC
TCGGCCAGGCCGTGCGCGGCCTGCTGCCCGGGCGCTTGCGCGCCAAGGTGCCGCCGCGCCAGCAGGCCGGCCGCTGGCCC
GCCGCCAGCCACGCGCGCAAGGTGCTGCTGCTGCAGGGCTGCGTGCAGCCCGCCATGGCGCCCAACATCAACGCCGCCAC
GGCGCGCGTGCTCGACGCCGCGGGCATCCAGACCCTGGTGGCGCCCGAGGCCGGCTGCTGCGGCGCTGTGAAGTTCCACC
TGAACGACCAGGACGGCGGCCGCGCGCAGATGCGCGCGAACATCGACGCCTGGTGGCCCTACATCGAGCGCGGCGCGGTG
GAATGCATCGTCATGAACGCCTCGGGCTGCGGCGTCACCGTGAAGGAATACGGCTACATGCTGCGCCTGGACCCGCAGTA
CGCCGAGAAGGCGGCGCGCGTGAGCGCCTTGACGCGCGACCTGTCCGAGCTGCTGCCCGACCTGGTGCCGCTGCTCAAGG
ACCGCGTGCGGCCCGCCGGCCGGGCCTTCGCCTACCACCCGCCGTGCACCCTGCAGCACGGCCAGAAGCTGCGCGGCGGC
GTGGAGCGGCACATGGCGGCGCTGGGCTTCACGCTGCGCGTGGCCCGCACCGAGTCGCACCTGTGCTGCGGCGCGGCCGG
CACCTATTCCGTGCTCAACCCGGAGCTCTCCTACCAGCTGCGCGACCGCAAGCTGGGCGTGCTGGGCGCGGCCTTCGCGG
ACGAACCGCCCGCGGCCATCCTGTCGGCCAACATGGGCTGCATCACGCACCTGCAAAGCGGAACGGAGATTCCCGTCAGG
CACTGGGTGGAGCTGCTCGACGAGGCATTGCTGGCATGA

Protein sequence :
MQTQLAPEYQGTPEGQEAEAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGQEPTRKTQLHLDRCLTCRN
CESTCPSGVQYGHLVDIGRRIVEEKVPRPRGEAAVRWALKEGLPSPLFAPAMKLGQAVRGLLPGRLRAKVPPRQQAGRWP
AASHARKVLLLQGCVQPAMAPNINAATARVLDAAGIQTLVAPEAGCCGAVKFHLNDQDGGRAQMRANIDAWWPYIERGAV
ECIVMNASGCGVTVKEYGYMLRLDPQYAEKAARVSALTRDLSELLPDLVPLLKDRVRPAGRAFAYHPPCTLQHGQKLRGG
VERHMAALGFTLRVARTESHLCCGAAGTYSVLNPELSYQLRDRKLGVLGAAFADEPPAAILSANMGCITHLQSGTEIPVR
HWVELLDEALLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 2e-102 56