|
Name : Alide_4025 (Alide_4025) Accession : YP_004128618.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Unknown Product : integrating conjugative element protein, pfl4705 Function : - COG functional category : S : Function unknown COG ID : COG4487 EC number : - Position : 4195744 - 4197162 bp Length : 1419 bp Strand : + Note : TIGRFAM: Integrating conjugative element protein, PFL4705; KEGG: bpt:Bpet1079 hypothetical protein DNA sequence : ATGCGCAGTAACGGACTCCTGAAGTGGCTGATGATCCCCGTCGCCATCCTGGTGCTGTTCGTCGGCATCCGCCTGTTCTC GGGTGGAAGCACGTCGGCGCCGCCCGCTAGCGATGCCGGCGCCCAGCTCACGCCAGAAGAAATGAAGGCGTTGGGCATCG AAGGCGATACCCCGCGCGACACCGTGGCCACGCTCGTCGCCCAAGTGAAGCAGTTGCGCACCGAGCTTCAGACGGCGCTC TCGGACAACAAGTCCCAGCGCGAAGAGAACCAGCGCCTGCGTCAGCGCGAGAACTCGATCGACCAGCGCATCAACTCTGC GCTGGAGTCCGAGCGCTCCAACCTGCGGCGCGACCAGGAGCAGGCGGCCAGCACGCGCCAGCAGACCGAAGGGCTACTCG CCGACCTACAGCGGCGCCTGGACAGCATTGGTGGGCGCGGTGGCAGCCATGCCGATCTGCCCGTGGGCCTGGGGCTGCAG GGGGGCGACGAGGCCGGGATGGAAGGCGGCATGCGCTGGGTTGAACCGGATGACGCGAAGCCTGCCGAGGGACGCAACAG GGGGCGCGGCACGGCTGGCGGCATGAGCTTCCCGACGAGCTTCGGCCCCGAGCAGAGCACGTTGCAAACCACGGCGGAAA CCGTGGCGAACGCCGGGGCACGCGCCGCGGGCGTCAAGACCGCAAAGCCCGTCTATACCGTCCCCACGAACTCCACGCTC ATGGGCTCGGTGGCGATGACAGCGCTGATCGGGCGTGTGCCGATCGACGGCACCGTCAACGACCCGTACCCCTTCAAGGT GCTGGTGGGGCCGGACAACCTCACGGCGAACGGCATCGACATTCCCGATGTGGCCGGCGCCGTGTTCAGCGGCACCGCCT CGGGCGACTGGACGCTTTCTTGCGTGCGCGGCCAGGTGCGCAGCATCACGTTCGTCTTCAACGACGGCACGATTCGCACG ATCCCCGAAGACCGCGAAGGAAACCAGCAGAACAACCAGCAGCGCGATGGCTTGGGCTGGATCAGCGATCCCCACGGCAT TCCTTGCGTCAGCGGCGAGCGGCGCAGCAACGCCCAGCAGTACCTCGGCTCGCAGGCCCTGATCACCGCGGCCGGTGCCG GCGTGGCCTCGCTCATCGAGAGCGACAGCGGCCGCATGTCCTATGTCGGCTCGGACGGCTCCATCGGCACCGTGGGCATC AGCGGCCAGGAGGCGGTCGGCCAGATTCTGGCGGGCGGCGTGCGGGACATGTCGGCCTGGGTCAACAAGCTCTACGGCCA AGCGTTCGCCGCCGTCTATGTCCAGCCCGGCGCGAAGGTCGCCGTCCACCTCGAAAAGCCGCTCGCCATCGACTTCGATC CCGAAGGCCGCAAGGTCGATCACCGCACAGGAGAAAGCCATGCTCTCGAACTTGAATAG Protein sequence : MRSNGLLKWLMIPVAILVLFVGIRLFSGGSTSAPPASDAGAQLTPEEMKALGIEGDTPRDTVATLVAQVKQLRTELQTAL SDNKSQREENQRLRQRENSIDQRINSALESERSNLRRDQEQAASTRQQTEGLLADLQRRLDSIGGRGGSHADLPVGLGLQ GGDEAGMEGGMRWVEPDDAKPAEGRNRGRGTAGGMSFPTSFGPEQSTLQTTAETVANAGARAAGVKTAKPVYTVPTNSTL MGSVAMTALIGRVPIDGTVNDPYPFKVLVGPDNLTANGIDIPDVAGAVFSGTASGDWTLSCVRGQVRSITFVFNDGTIRT IPEDREGNQQNNQQRDGLGWISDPHGIPCVSGERRSNAQQYLGSQALITAAGAGVASLIESDSGRMSYVGSDGSIGTVGI SGQEAVGQILAGGVRDMSAWVNKLYGQAFAAVYVQPGAKVAVHLEKPLAIDFDPEGRKVDHRTGESHALELE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C49 | AAN62143.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 97 |
| ORF SG59 | AAN62281.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 1e-149 | 72 |
| pph82 | CAI36123.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 2e-106 | 48 |
| unnamed | ABR13364.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 2e-105 | 47 |
| EXA35 | ABD94644.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-105 | 47 |
| RL024 | AAP84151.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 9e-101 | 47 |
| YpsIP31758_3707 | YP_001402661.1 | hypothetical protein | Not tested | YAPI | Protein | 8e-83 | 42 |
| api37 | CAF28511.1 | putative exported protein | Not tested | YAPI | Protein | 9e-84 | 42 |
| YE3484 | YP_001007643.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-76 | 42 |
| PMI2579 | YP_002152298.1 | hypothetical protein | Not tested | Not named | Protein | 3e-79 | 41 |
