Gene Information

Name : Alide_4093 (Alide_4093)
Accession : YP_004128684.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : malate synthase g
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 4273216 - 4275414 bp
Length : 2199 bp
Strand : +
Note : TIGRFAM: malate synthase G; KEGG: dia:Dtpsy_0327 malate synthase G; PFAM: Malate synthase family protein

DNA sequence :
ATGACCGCACGTACCCAAGTCCATGGCCTGCAGGTGGCCAACGAACTGCACGCCTTCATCAACCAGCAGGTGCTGCCCGG
CACTGGCGTCGATCCTGCGGCCTTCTGGAAGGGTTTTGACGCCATCGTCGCCGATCTCGCGCCCAAGAACGCCGCCCTGC
TGGCCGAGCGCGACCGCCTGCAGAAGGAACTGGACACCTGGCACAAGGCCAACCCCGGCCCCATCACGGACATGGTGGGC
TACCGCGCCTTCCTCTCGCGCATCGGCTACCTCGTCGAGCCGCCCAAGGGCGCCAAGGCCAGCACGGCGAACGTGGATGC
CGAGCTGGCCATCCAGGCCGGCCCGCAGCTCGTGGTGCCCATCCTGAACGCGCGCTATGCGCTCAACGCGGCCAATGCGC
GCTGGGGCTCGCTCTACGACGCGCTCTACGGCACCGACGTGATCGGCGAGGAGGGCGGCGCCGAGAAGGGCAAGGGCTAC
AACCCCGTGCGCGGCGCGAAAGTGATTGAATTCGCGCGCAACTTCCTGGACCAGGCCGCGCCGCTGGCCTCCGGCTCGCA
CAAGGACGCCACGGCCTACAGGGTGGAGGGCGGCAAGCTGGCCGTCGCGCTCAAGGATGGTGGCGCCACCGGCCTGAAGG
ACGCCGCGCAGTTCGTAGGCTACCAAGGTGACGCGGCAGCGCCCTCGTCCGTGCTGCTGGTGAACAACGGCCTGCACATC
GACATCCGCATCGACCGCGGCACCCCCATCGGCAAGGGCGATGCCGCCGGCGTGGCCGACGTGGTGGTGGAGGCGGCCCT
GTCCACCATCCTCGACCTGGAGGACTCCGTCGCCGCCGTGGATGCCGAGGACAAGGTGCTGGGCTACGGCAACTGGCTGG
GCATCCTCAAGGGCACGCTGACCGAGACCTTCGAGAAAGGCGGCAAAGCCATGACGCGCGGTCTGAACCCCGACCGCGAG
TACACGGGCGCCGACGGCAGGCCGGTGAAACTGCACGGCCGCTCGCTGATGTTCGTGCGCAACGTGGGCCACCTGATGAC
CAACCCCGCCATCCTGTGGGGCGCCGAGGGCAAGGAGATCCCCGAGGGCATCCTGGACGCCGTGGTCACCACGGCCATCG
CGCTGCACGACCTCAAGGGCCTGGGCACGCCGGGCATCCGAAACAGCCGTACGGGCAGCGTCTACATCGTCAAGCCCAAG
ATGCACGGCCCGGCCGAGGTGGCCTTCGCCAACGAGCTGTTCGGCCGCGTCGAGCTGCTGCTGGGCCTGCCCGACAGCAC
CGTCAAGCTCGGCATCATGGACGAGGAGCGCCGCACCTCGGTCAACCTCCAGGCCTGCATCGCCGCCGCCAGCACCCGCG
TGGCCTTCATCAACACGGGCTTCCTCGACCGCACGGGCGACGAAATGCACACCGCCATGCACGCCGGCCCCATGATCCGC
AAGGGCGACATGAAGACCAGCGCCTGGATCCAGGCCTATGAGAAGAACAACGTGCTCGTGGGCCTGTCGATGGGCCTGCG
CGGCAAGGCCCAGATCGGCAAGGGCATGTGGGCCATGCCGGACCTGATGAAGGCCATGCTGGAGCAGAAGATCGCCCATC
CCAAGGCGGGCGCCAACACCGCCTGGGTGCCCAGCCCCACGGGCGCCACGCTGCACGCCCTGCACTACCACCAGGTGAAG
GTGAGCGACATCCAGCAGGAGCTGGAGAAGATCGACGCCCTGGCCGAACGCGACAACCTGCTGGCCGGCCTGCTCACCGT
GCCCGTGACCGCCTCCCCGAACTGGAGCGAGCAGGAAAAGCAGCAGGAGCTGGACAACAACATCCAAGGCATCCTGGGCT
ACGTGGTACGCTGGGTGGACCAGGGCGTGGGCTGCTCCAAGGTGCCCGACATCAACGACGTGGGCCTGATGGAAGACCGC
GCCACCCTGCGCATCTCCAGCCAGCACGTCGCCAACTGGCTCCTGCACGGCATCGTGACCGAAGGCCAGGTGCGCGCCAC
CTTCGAGCGCATGGCCGCCAAGGTGGACCAGCAAAATGGCGGCGACCCGCTGTACCAGCGCATGCACGGGCGCTTCGGCG
AATCCATGGCCTACCAGGCGGCCTGCGACCTGGTGTTCAAGGGCGTCGAGCAGCCCAGCGGCTACACCGAGCCGCTGCTG
CATGCCTGGCGCCTGAAGGTCAAGGCGGCTGCCGCCTGA

Protein sequence :
MTARTQVHGLQVANELHAFINQQVLPGTGVDPAAFWKGFDAIVADLAPKNAALLAERDRLQKELDTWHKANPGPITDMVG
YRAFLSRIGYLVEPPKGAKASTANVDAELAIQAGPQLVVPILNARYALNAANARWGSLYDALYGTDVIGEEGGAEKGKGY
NPVRGAKVIEFARNFLDQAAPLASGSHKDATAYRVEGGKLAVALKDGGATGLKDAAQFVGYQGDAAAPSSVLLVNNGLHI
DIRIDRGTPIGKGDAAGVADVVVEAALSTILDLEDSVAAVDAEDKVLGYGNWLGILKGTLTETFEKGGKAMTRGLNPDRE
YTGADGRPVKLHGRSLMFVRNVGHLMTNPAILWGAEGKEIPEGILDAVVTTAIALHDLKGLGTPGIRNSRTGSVYIVKPK
MHGPAEVAFANELFGRVELLLGLPDSTVKLGIMDEERRTSVNLQACIAAASTRVAFINTGFLDRTGDEMHTAMHAGPMIR
KGDMKTSAWIQAYEKNNVLVGLSMGLRGKAQIGKGMWAMPDLMKAMLEQKIAHPKAGANTAWVPSPTGATLHALHYHQVK
VSDIQQELEKIDALAERDNLLAGLLTVPVTASPNWSEQEKQQELDNNIQGILGYVVRWVDQGVGCSKVPDINDVGLMEDR
ATLRISSQHVANWLLHGIVTEGQVRATFERMAAKVDQQNGGDPLYQRMHGRFGESMAYQAACDLVFKGVEQPSGYTEPLL
HAWRLKVKAAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 63