Gene Information

Name : Alide_4230 (Alide_4230)
Accession : YP_004128819.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : protein-export membrane protein secf
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0341
EC number : -
Position : 4424851 - 4425804 bp
Length : 954 bp
Strand : -
Note : KEGG: dia:Dtpsy_3354 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein

DNA sequence : 
ATGGAATTTTTCCGCATCAAAAAAGACATCCCGTTCATGAAGTACGCGTTGGTGCTCAACGCGGTGTCCTTCATCACCTT
CGCCCTGGCGGTATTCTTCCTGGTCACGCGCGGCCTGCACCTGTCGGTGGAGTTCACCGGCGGCACCGTCATGGAGGTGG
CCTACGCGCAGACCGCCGACATCGGCAAGGTGCGCGACAAGGTGGCGGCGCTGGGCTATCCCGACGTGGTGGTGCAGAAC
TTCGGCACCTCGCGCGACGTGATGATCCGCCTGCCCGTGCAGAAGGGCGTGACCTCGGCCCAGCAGAGCGAGCAGGTGCT
GGCCGCGCTCAAGAGCGAGGATCCGGGCGTCACGCTGCGGCGCACCGAGTTCGTCGGCCCGCAGGTCGGCGAGGAACTGG
TGCACGGCGGCCTCATGGCGCTGGGCATGGTGGTGCTGGGCATCGTGATCTACCTGGCCCTGCGCTTCGAGTGGAAGTTC
GGCGTCGCGGCCATCATCGCCAACCTGCACGACGTGGTCATCATCCTGGGCTTCTTCGCGTTCTTCCAGTGGGAGTTCTC
GCTCTCGGTGCTCGCGGGCGTGCTGGCGGTGCTGGGCTACTCGGTCAACGAGTCGGTCGTGATCTTCGACCGGATCCGCG
AGGCCTTCCGCAAGTTCCGCAAGCTCAATACGCACGAGGTGATCGACCACGCCATCACCTCGACGATGAGCCGCACCATC
ATCACCCACGCCTCGACCGAGGCCATGGTGCTTTCGATGTTCTTCTTTGGCGGCCCCAGCCTGCACTATTTCGCGCTGGC
GCTGACCATCGGCATCCTGTTCGGCATCTACTCCTCGGTGTTCGTGGCGGCGGCCATCGCCATGTGGCTGGGCGTCAAGC
GCGAGGACTTGGTCAAGGCTTCCGCGCGCAAGGAGGAAGACCCCAACGACCCCAACTCGGGAGCCGTTGTGTGA

Protein sequence : 
MEFFRIKKDIPFMKYALVLNAVSFITFALAVFFLVTRGLHLSVEFTGGTVMEVAYAQTADIGKVRDKVAALGYPDVVVQN
FGTSRDVMIRLPVQKGVTSAQQSEQVLAALKSEDPGVTLRRTEFVGPQVGEELVHGGLMALGMVVLGIVIYLALRFEWKF
GVAAIIANLHDVVIILGFFAFFQWEFSLSVLAGVLAVLGYSVNESVVIFDRIREAFRKFRKLNTHEVIDHAITSTMSRTI
ITHASTEAMVLSMFFFGGPSLHYFALALTIGILFGIYSSVFVAAAIAMWLGVKREDLVKASARKEEDPNDPNSGAVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96102.1 SecF Not tested T-PAI Protein 2e-47 43
secF AAT96066.1 SecF Not tested T-PAI Protein 2e-47 43