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Name : Alide_4231 (Alide_4231) Accession : YP_004128820.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Unknown Product : protein-export membrane protein secd Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 4425816 - 4427711 bp Length : 1896 bp Strand : - Note : KEGG: dia:Dtpsy_3355 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein DNA sequence : ATGAACCGTTACCCGGTCTGGAAGTACGCGATCCTGGTGATCGCGTTGCTCATAGGGGCCTTGTACACTCTGCCCAATTT CTTCGGCGAGGCGCCTGCCGTGCAGGTGTCCTCGGCCAAGGCCACGATCAAGGTCGATGGCGCGCTGCAGCGGCGCGTCG AGGAGGTGCTCCAGTCGGCCGGGGTGAGCCCGGACTCGGTGGTGTTCGACGGCCACTCGGTGCGCGCGCGCTTCGATACA CCGGACAATCAGCTCAAGGCCAAGGACGCGATCGAGAAGGCGCTGGTCCCCGACCCGTCCGACCCGCCCTACATCGTCGC GCTTAACCTCGTGTCGCGCTCGCCCGACTGGCTGACCGCGATCAACGCCCGCCCCATGTACCTGGGGCTGGACCTGCGCG GCGGCGTGCACTTCATGCTGCAGGTGGACATGCAGGCGGCCATCACCAAGAAGGCTGAGTCCTATGCCGGCGACCTGCGT ACCGCCCTGCGCGAGAAGAACATCCGCCACGGCGGCATCAGCCGCGACGGCCAGGCCGTGGACATCCGCGTGCGCGACGA GGCCACGGCCACGGCGGCGCGCAACCTGGTCGCCGACCAGTTCCCCGACCTCGTGGTCGCGAGCAGCCCCGATGGCGAGG GCCTGAGGCTGCGCGCCACGATCAAGCCCGAGGCCCTGCGCAAGGTGCAGGAGCAGGCGCTCAAGCAGAACATGGTCACG CTGCACAACCGCATCAACGAGCTCGGCGTGGCCGAGCCCGTGATCCAGCAGCAGGGGCTGGACCGCATCGTCGTGCAGCT GCCCGGCGTGCAGGACACGGCCAAGGCCAAGGACATCCTGGGCCGCACCGCCACGCTGGAGGTGCGCATGGTGGACGAGG GCACCGAGGCACGCGCCGCCGAGATGGGCACCGGCCCCGTGCCCTTCGGCGACGAGAAATACCTGGACCGCAACGGCCAG GCCGTGATCGTCAAGAAGCAGGTCATCCTCACGGGCGAGAACCTGACCGACGCCCAGCCCGGCTTCGACGGCCAGACCCA GGAGCCCACCGTGAACCTCACGCTGGACGCCAAGGGCTCGCGCATCTTCAAGGACGTGACGCGCGAGAACATCGGCAAGC GCATGGCCATCGTGCTGTTCGAGAAGGGCAAGGGCGAGGTCGTCACGGCCCCGGTGATCCGCAGCGAGATCGGCGGCGGG CGCGTGCAGATCTCGGGCCGCATGACCACCACCGAGGCCAACGACACGGCCCTGCTGCTGCGCGCCGGGTCGCTCGCCGC GCCCATGGAGATCATCGAGGAATACACCATCGGCCCGAGCCTGGGCGCGGACAACATCGCGCGCGGCATCCACAGCGTGG TCTGGGGCATGGCGGCGATCGCGGCCTTCATGTGCGTGTACTACGTGCTGTTCGGCGTGTTCTCCACCATCGCGCTCTCG GTGAACGTGCTGATGCTCATCGCCGTGCTGTCCATGCTGCAGGCCACGCTCACGCTGCCAGGCATCGCCGCCATGGCGCT GGCCCTGGGCGTGGCGATCGACTCCAACGTGCTGATCAACGAACGCATCCGCGAGGAACTGCGCGCGGGCGTGGCGCCGC AGGCGGCGATCGCCGCGGGCTACGAGCGCGCCTGGGCCACCATCCTGGACTCCAACGTCACCACGCTGATCGCGGGCCTG GCGCTGCTGGCCTTCGGCACGGGGCCGGTGCGCGGCTTCGCCGTGGTGCACTGCATCGGCATCCTGACCAGCATGTTCTC GGCCGTGTTCTTCTCGCGCGGCCTGGTCAACCTCTGGTATGGCCGCAAGAAGAAGCTCAAGAGCGTGGCCATCGGCCAGG TGTGGAAGCCCGAGGACGCGAGCGAGCTGCGCTCCGTGGCTGGCCGTAGTAACTAG Protein sequence : MNRYPVWKYAILVIALLIGALYTLPNFFGEAPAVQVSSAKATIKVDGALQRRVEEVLQSAGVSPDSVVFDGHSVRARFDT PDNQLKAKDAIEKALVPDPSDPPYIVALNLVSRSPDWLTAINARPMYLGLDLRGGVHFMLQVDMQAAITKKAESYAGDLR TALREKNIRHGGISRDGQAVDIRVRDEATATAARNLVADQFPDLVVASSPDGEGLRLRATIKPEALRKVQEQALKQNMVT LHNRINELGVAEPVIQQQGLDRIVVQLPGVQDTAKAKDILGRTATLEVRMVDEGTEARAAEMGTGPVPFGDEKYLDRNGQ AVIVKKQVILTGENLTDAQPGFDGQTQEPTVNLTLDAKGSRIFKDVTRENIGKRMAIVLFEKGKGEVVTAPVIRSEIGGG RVQISGRMTTTEANDTALLLRAGSLAAPMEIIEEYTIGPSLGADNIARGIHSVVWGMAAIAAFMCVYYVLFGVFSTIALS VNVLMLIAVLSMLQATLTLPGIAAMALALGVAIDSNVLINERIREELRAGVAPQAAIAAGYERAWATILDSNVTTLIAGL ALLAFGTGPVRGFAVVHCIGILTSMFSAVFFSRGLVNLWYGRKKKLKSVAIGQVWKPEDASELRSVAGRSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 41 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 8e-100 | 41 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-99 | 41 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 41 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 41 |
