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Name : Mesci_3614 (Mesci_3614) Accession : YP_004142784.1 Strain : Mesorhizobium ciceri WSM1271 Genome accession: NC_014923 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 3767585 - 3771721 bp Length : 4137 bp Strand : + Note : KEGG: mlo:mlr0276 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase subunit beta; RNA polymerase Rpb2 domain 2; DNA-directed RNA p DNA sequence : ATGGCCCAGACCCAGACTTTCAATGGCCGCAGACGCGTACGCAAGTTCTTCGGAAAGATTCCGGAAGTTGCGGAGATGCC GAACCTGATCGAGGTTCAGAAGGCATCCTATGACCAGTTCCTGATGGTGGCGGAGCCCAAGGGTGGGCGTCCGGACGAGG GGCTGCAGGCCGTTTTCAAGTCGGTCTTCCCGATCTCCGATTTTTCCGGCTCCTCCATGCTGGAGTTCGTGAAGTACGAG TTCGAAGGACCGAAATTCGACGTTGACGAATGCCGTCAGCGCGACCTCACCTATGCCGCGCCGCTCAAGGTGACGCTGCG CCTCATCGTGTTCGATATTGACGAGGATACCGGCGCCAAGTCCATCAAGGACATCAAGGAGCAGGACGTCTACATGGGCG ACATGCCGCTCATGACCTTGAACGGCACCTTTATCGTCAACGGCACCGAGCGCGTCATCGTTTCGCAGATGCACCGTTCG CCGGGCGTCTTCTTCGACCATGACAAGGGCAAGTCGCACTCGTCGGGCAAGCTTCTGTTTGCCGCGCGTGTCATCCCGTA TCGCGGTTCGTGGCTCGACATCGAGTTCGATTCCAAGGACGTCGTGCACGCCCGCATCGATCGCCGCCGCAAGATTCCGG TGACGTCGCTGCTGATGGCGCTCGGCATGGACGGCGAAGAGATCCTGTCGACCTTCTACAACAAGATCACCTACAAGCGT GCCGGCGACCATTGGCGCATTCCGTTCAACGTCGAGCGTTTCCGCGGCCTCAAGGCTGTCGGCGACCTTGTCGATGCCGA TACCGGCGAAGTCGTCGTCGAGGCCGGCAAGAAGATCACCGCACGCCAGGCACGGGCGCTTGGCGAAAAGGGTCTGAAGG CGATCAAGGCGACCGACGAGGACCTGCTCGGCAACTATCTGGCCGAGGACATCGTCAACTACGCCACCGGCGAGATCTTC CTCGAGGCCGGTGACGAGATCGACGAGAAGACGCTGAAGGTGCTGCTCGGCACCGGCGAAGAGGAGATCAAGGTTCTCGA CATCGACCACGTCAATGTCGGCGCCTATATCCGCAACACGCTCAACGTCGACAAGAACGAGAGCCGCCAGGACGCGCTGT TCGACATCTATCGTGTCATGCGCCCCGGCGAGCCGCCGACGCTCGAAACCGCCGAAGCCATGTTCAACTCGCTGTTCTTC GATAGCGAGCGCTACGATCTGTCGGCCGTCGGCCGCGTCAAGATGAACATGCGCCTCGAGCTGAAGGCCGAGGACACCGT GCGCGTGCTGCGCAAGGACGACATCCTGGCCGTGGTCAGGACGCTGGTTGAACTGCGCGACGGCAAGGGCGAGATCGACG ACATCGACAATCTCGGCAACCGCCGCGTGCGTTCAGTCGGCGAGCTGATGGAAAACCAGTACCGCGTCGGCCTGCTGCGC ATGGAGCGCGCGATCAAGGAGCGTATGTCCTCGATCGAGATCGACACGGTCATGCCGCAGGATCTGATCAACGCCAAGCC GGCGGCTGCCGCCGTGCGCGAGTTCTTCGGTTCCTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAGA TCACCCACAAGCGCCGCCTCTCGGCGCTTGGACCGGGCGGTCTGACCCGCGAGCGCGCCGGCTTCGAAGTGCGCGACGTG CACCCGACGCATTACGGCCGCATCTGCCCGATCGAGACGCCGGAAGGCCCGAATATCGGTCTGATCAACTCGCTGGCCAC CTTCGCACGCGTCAACAAGTACGGCTTCATCGAGAGCCCGTACCGCAAGATCGTCGACGGCAAGCTGACCAATGACGTCG TCTATCTCTCGGCGATGGAAGAGGCCAAGCACCACGTCGCGCAGGCCAATGCCGAACTCGACAAGAACGGTGGTTTCGTC GACGAATTCGTCATTTGCCGCAGCGCCGGCGAAGTGATGATGGCGCCGCGCGAAAACGTCGATCTGATGGACGTGTCGCC CAAGCAGATGGTGTCGGTGGCCGCGGCCCTGATCCCGTTCCTGGAAAACGACGACGCCAACCGCGCTCTGATGGGTTCGA ACATGCAGCGTCAGGCCGTGCCGCTGGTGCGCGCCGAGGCGCCGTTCGTCGGCACCGGCATGGAGCCGATCGTCGCCCGT GACTCGGGCGCCGCCATCGGCGCCCGCCGCGGCGGCATCGTCGACCAGGTGGACGCGACGCGTATCGTTATCCGCGCCAC CGAAGATCTCGATCCGGGCAAGTCCGGCGTCGACATCTACCGGTTGATGAAGTTCCAGCGTTCGAACCAGAACACCTGCA TCAACCAGCGCCCGCTGGTTCGCATGGGCGACCGGGTCAACAAGGGCGACATCATCGCCGACGGTCCGTCGACCGAGCTC GGTGATCTGGCGCTCGGCCGCAACGTGCTGGTCGCGTTCATGCCGTGGAACGGCTACAACTACGAGGACTCGATCCTCCT GTCCGAACGCATCGTCGCCGACGACGTCTTCACCTCGATCCACATCGAGGAGTTCGAGGTCATGGCGCGCGATACCAAGC TTGGACCGGAGGAAATCACGCGCGATATCCCGAACGTCTCGGAAGAAGCGCTGAAGAACCTCGACGAAGCCGGCATCGTC TACATCGGTGCGGAAGTTCAGCCGGGCGACATCCTGGTCGGCAAGATCACGCCGAAGGGCGAAAGCCCGATGACCCCGGA AGAGAAGCTTCTGCGCGCCATCTTCGGCGAAAAGGCATCCGATGTGCGCGACACCTCGATGCGCATGCCTCCTGGCACCT TCGGCACCGTCGTCGAGGTGCGCGTCTTCAATCGCCACGGTGTGGAGAAGGACGAGCGCGCCATGGCGATCGAGCGCGAG GAGATCGAACGCCTCGCCAAGGACCGCGACGACGAGCAGGCCATTCTGGACCGCAACGTCTATGCGCGTCTTTCCGACGT GCTCGTCGGCAAGGAAGCGATCGCTGGACCGAAGGGCTTCAAGAAGGGCTCGACGCTGTCCAAGGATACGCTCGACGAGT ATCCGCGTTCGCAGTGGTGGCAGTTTGCCGTGGAGAACGAAAAGCTCCAGAGCGAGCTGGAAGCGCTGCGTGGCCAGTAC GACGATTCCAAGAAGGCGCTCGAGCAGCGTTTCATGGACAAGGTCGAGAAGGTCCAGCGCGGCGACGAAATGCCTCCGGG CGTCATGAAGATGGTCAAGGTCTTCGTGGCCGTGAAGCGCAAGATGCAGCCCGGCGACAAGATGGCCGGCCGTCACGGCA ACAAGGGTGTCGTGTCGCGGATCGTTCCGGTCGAGGACATGCCTTTCCTCGAGGACGGCACGCATGCCGATATCGTGCTC AACCCGCTGGGTGTGCCGAGCCGCATGAATGTCGGCCAGATCCTGGAAACGCATCTGGGCTGGGCATGTGCGGGCATGGG CAGGAAGATCGGCGAGCTGATCGACACGTACAAGGCAGCGGGCGACATCAAGCCGCTGCGCAAGACGCTCGAGAGCTTCA TCCCGGCCAACGACCGCAACGAGCCGGTTCGCGACTATGACGACGAGAGCATCGTTCGCCTCAGCGAGCAGATGCGCCGC GGCGTCTCGATCGCGACCCCGGTGTTCGACGGCGCGCATGAGGCTGACATCAACATCATGCTGGAGCAGGCGGGCCTGCA CAGCAGCGGTCAGTCGCAGCTCTATGACGGACGCACGGGCGAGCCGTTCGATCGCAAGGTGACGATGGGCTACATCTACA TGCTCAAGCTTCACCATCTCGTGGACGACAAGATCCACGCGCGTTCGATCGGTCCGTACTCGCTCGTCACCCAGCAGCCG CTGGGCGGCAAGGCGCAGTTCGGTGGCCAGCGCTTCGGCGAGATGGAGGTCTGGGCGCTGGAAGCGTACGGCGCCGCCTA CACGCTGCAGGAAATGCTGACGGTGAAGTCCGACGACGTCGCCGGCCGTACCAAGGTCTACGAGGCGATCGTGCGTGGCG ACGACACCTTCGAGGCCGGCATCCCGGAGAGCTTCAACGTTCTCGTCAAGGAAATGCGGTCTCTCGGCCTCAACGTCGAG CTGGAGAACACCAAGCTCGACGACAACCCTGTCCGGCTGCCCGACGCGGCCGAGTAA Protein sequence : MAQTQTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVAEPKGGRPDEGLQAVFKSVFPISDFSGSSMLEFVKYE FEGPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAKSIKDIKEQDVYMGDMPLMTLNGTFIVNGTERVIVSQMHRS PGVFFDHDKGKSHSSGKLLFAARVIPYRGSWLDIEFDSKDVVHARIDRRRKIPVTSLLMALGMDGEEILSTFYNKITYKR AGDHWRIPFNVERFRGLKAVGDLVDADTGEVVVEAGKKITARQARALGEKGLKAIKATDEDLLGNYLAEDIVNYATGEIF LEAGDEIDEKTLKVLLGTGEEEIKVLDIDHVNVGAYIRNTLNVDKNESRQDALFDIYRVMRPGEPPTLETAEAMFNSLFF DSERYDLSAVGRVKMNMRLELKAEDTVRVLRKDDILAVVRTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLR MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDV HPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKIVDGKLTNDVVYLSAMEEAKHHVAQANAELDKNGGFV DEFVICRSAGEVMMAPRENVDLMDVSPKQMVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVAR DSGAAIGARRGGIVDQVDATRIVIRATEDLDPGKSGVDIYRLMKFQRSNQNTCINQRPLVRMGDRVNKGDIIADGPSTEL GDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIV YIGAEVQPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIERE EIERLAKDRDDEQAILDRNVYARLSDVLVGKEAIAGPKGFKKGSTLSKDTLDEYPRSQWWQFAVENEKLQSELEALRGQY DDSKKALEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKRKMQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHADIVL NPLGVPSRMNVGQILETHLGWACAGMGRKIGELIDTYKAAGDIKPLRKTLESFIPANDRNEPVRDYDDESIVRLSEQMRR GVSIATPVFDGAHEADINIMLEQAGLHSSGQSQLYDGRTGEPFDRKVTMGYIYMLKLHHLVDDKIHARSIGPYSLVTQQP LGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVE LENTKLDDNPVRLPDAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 59 |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 60 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 59 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 58 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 58 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 58 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 57 |
| Mesci_3614 | YP_004142784.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 57 |
