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Name : Varpa_0226 (Varpa_0226) Accession : YP_004152559.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : fad linked oxidase domain-containing protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 242785 - 244287 bp Length : 1503 bp Strand : + Note : PFAM: FAD linked oxidase domain protein; KEGG: vap:Vapar_0222 FAD linked oxidase domain protein DNA sequence : ATGAATGCGCCGCTCACTGCCGTCCAGCAAGATTCGCTACAGAAAACGGAGCGCCAGTCGCAAGTCGTGCGCGCGCTGCA GGTCCACCTGCCCGCGCATGCCCTGATCTGGCATGCCGAAGACACCACGCCCTACGAGTGCGACGGCCTCACCGCCTACC GGCAGCGGCCGCTCGTCGTGGCCCTGCCCGAGACCGAGGCGCAGGTCGCCGCCGTGCTCAAGACCTGCCATCAGCTTGGC GTGCCCGTGGTGGCGCGCGGCGCGGGTACCGGGCTTTCGGGCGGCGCGATGCCTCATGCGCTGGGCGTGACGCTCTCGCT CGCCAAGTTCAACCGCATCCTGAAGATCGACCCGGTGAGCCGCACGGCCGTCGTGCAGTGCGGCGTGCGCAACCTCGCGA TCAGCGAGGCGGCCGCGCCGTTCAACCTCTACTACGCACCCGATCCGTCGAGCCAGATCGCCTGCACCATCGGCGGCAAC GTGGCCGAGAACTCGGGCGGCGTGCATTGCCTGAAGTACGGACTCACGCTGCACAACGTGCTGCGCGTGCGCGGCTTCAC CGCCGAAGGCGACGCCATCGAGTTCGGCGGCGAGGCGCTCGATGCGCCGGGGCTCGATCTGCTCGCGCTGGTCATCGGCA GCGAAGGCATGCTGGCCGTGACCACCGAGGTCACCGTCAAGCTCGTGCCCAAGCCGCAGCTCGCGCGCTGCATCATGGCC AGCTTCGACGACGTGCGCAAAGCCGGCGATGCGGTGGCCGCGGTGATCGCGGCCGGCATCATTCCCGCGGGGCTGGAGAT GATGGACAAGCCGATGACCGCCGCCGTCGAAGACTTCGTGCGCGCGGGCTACGACCTCGATGCCGCGGCGATCCTGCTGT GCGAATCGGACGGCACGCCTGAAGAAGTCGAAGAAGAAATCGGCCGCATGACCGCCGTGCTGCGCGGCTGCGGCGCCACC GCCATCGCGGTGAGCAACAGCGAAGAAGAGCGCATGAAATTCTGGAGCGGCCGCAAGAACGCCTTTCCGGCGTCGGGCCG CATCAGCCCGGACTACATGTGCCTGGATTCGACCATTCCGCGCAAGCGCCTCGCGGACATCCTGCTCGCGATCCAGGAGA TGGAGAAAAAGTACAACCTGCGCTGCTGCAACGTGTTCCACGCGGGCGATGGCAACCTGCATCCGCTGGTGCTGTTCGAT GCGAACGACCCCGACGAGCTGCATCGCTGCGAGCTCTTCGGCGCCGACATCCTGGAGACCAGCGTCGCGATGGGCGGCAC GGTGTCGGGCGAGCACGGCGTGGGCGTCGAAAAGCTCAACAGCATGTGCGTGCAGTTCACCGCGGCCGAGAACGAGCAGA TGTTCGGCGTGAAGCGTGCATTCGATCCGGCCGGGCTGTTGAATCCCGGCAAGGTGATTCCGACGCTGCAGCGCTGCGCC GAGTACGGCAAGCAGGTGGTGCGTGGTGGGAAGCTGCCGCATCCCGATCTGCCGCGCTTCTGA Protein sequence : MNAPLTAVQQDSLQKTERQSQVVRALQVHLPAHALIWHAEDTTPYECDGLTAYRQRPLVVALPETEAQVAAVLKTCHQLG VPVVARGAGTGLSGGAMPHALGVTLSLAKFNRILKIDPVSRTAVVQCGVRNLAISEAAAPFNLYYAPDPSSQIACTIGGN VAENSGGVHCLKYGLTLHNVLRVRGFTAEGDAIEFGGEALDAPGLDLLALVIGSEGMLAVTTEVTVKLVPKPQLARCIMA SFDDVRKAGDAVAAVIAAGIIPAGLEMMDKPMTAAVEDFVRAGYDLDAAAILLCESDGTPEEVEEEIGRMTAVLRGCGAT AIAVSNSEEERMKFWSGRKNAFPASGRISPDYMCLDSTIPRKRLADILLAIQEMEKKYNLRCCNVFHAGDGNLHPLVLFD ANDPDELHRCELFGADILETSVAMGGTVSGEHGVGVEKLNSMCVQFTAAENEQMFGVKRAFDPAGLLNPGKVIPTLQRCA EYGKQVVRGGKLPHPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 8e-130 | 60 |
