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Name : Varpa_2428 (Varpa_2428) Accession : YP_004154739.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : type VI secretion system lysozyme-like protein Function : - COG functional category : S : Function unknown COG ID : COG3518 EC number : - Position : 2627990 - 2628580 bp Length : 591 bp Strand : + Note : KEGG: rpf:Rpic12D_1689 type VI secretion system lysozyme-related protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein DNA sequence : ATGCGACCTGCCGAGCAGTCTTCTCCCTTCACCGGCTCCCATCCCGCACACCCCGGGGCCCGCTCCCTCCGGCCGGCCGA TGCCCCGGCGGCGCATCCCAATGCGCAATTGCTCCCCACGCTGTTCGACCGCCTGCGCGACGAGGCCCCGAGCCGCACCA GCGAGCTGCCCTCCGAGTACGCCGTCACGCCCGCGCAGATGCGCGACATCGTGCAGCGCGACCTGGCCTACCTGCTCAAC ACCACCAACGCCGAAGACCTGATCGACCGCTCGCGGCATGCCGAAGCGGCGTCCTCAACCATCAACTTCGGTGTGCCGCC GCTGGCGGGCAGCTACCTGTCGGAGCGCCGGTGGGCGGACATCGAACGCATCATCCGCCGCGCCATCCAGGACTACGAGC CGCGCCTGATTCCCGAGACGGTGACGGTCGTGCCGCTGATGAAGGAGGGCGGCGCGGCGGGTGAATACAACGTGCTGCTG TTCGAGATTCGGGCGCTGATTCACCTTCGGCCATATCCGCTGGCCTTCACCGTGCAGAGCGCGGTCGATCTGGAGACCAA CCGCATGCGCGTGATCTCTTCGGCGCGGTGA Protein sequence : MRPAEQSSPFTGSHPAHPGARSLRPADAPAAHPNAQLLPTLFDRLRDEAPSRTSELPSEYAVTPAQMRDIVQRDLAYLLN TTNAEDLIDRSRHAEAASSTINFGVPPLAGSYLSERRWADIERIIRRAIQDYEPRLIPETVTVVPLMKEGGAAGEYNVLL FEIRALIHLRPYPLAFTVQSAVDLETNRMRVISSAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0290 | NP_454872.1 | conserved hypothetical protein | Not tested | SPI-6 | Protein | 2e-32 | 49 |
