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Name : Varpa_2516 (Varpa_2516) Accession : YP_004154827.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : ribonuclease h Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 2731294 - 2731743 bp Length : 450 bp Strand : + Note : KEGG: vap:Vapar_2340 ribonuclease H; PFAM: ribonuclease H DNA sequence : TTGAACGAAGTCGTGATCTACACCGATGGTGCATGCAAGGGCAACCCCGGACCCGGGGGCTGGGGCGCGTGGCTCAAGTC GGGCGCCACCGAAAAGGAACTGTTCGGCGGCGAACTCAACACCACCAACAACCGCATGGAGCTGACCGCGGTCATCGAGG GTTTGGCCGCGCTCAAGCGCCCGTGCAAGGTGCTGCTCTACCTGGACAGCCAGTACGTGCGCAAGGGCATCACCGAGTGG ATCCGCGGCTGGAAGGCCAAGGGCTGGATGACCGCCAGCAAGCAGCCGGTGAAGAACGTCGAGCTCTGGCAGCGGCTGGA CAAGCTGGTGGCCGAGGGCGGCCACACGATCGAATGGCGCTGGGTCAAGGGCCACTCGGGCGACCCTGGCAACGAACGCG CCGACATGCTCGCCAACAAGGGCGTGGACAAAGCGCTGGGGCGGATCTGA Protein sequence : MNEVVIYTDGACKGNPGPGGWGAWLKSGATEKELFGGELNTTNNRMELTAVIEGLAALKRPCKVLLYLDSQYVRKGITEW IRGWKAKGWMTASKQPVKNVELWQRLDKLVAEGGHTIEWRWVKGHSGDPGNERADMLANKGVDKALGRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 5e-34 | 55 |
