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Name : Varpa_2907 (Varpa_2907) Accession : YP_004155209.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : type VI secretion system vgr family protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 3129208 - 3131541 bp Length : 2334 bp Strand : + Note : TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: vap:Vapar_0201 type VI secretion system Vgr family protein DNA sequence : ATGGCGCGAGTCGTAACGGCGCATACGCCACTGGGTGAAGAGCAGCTGAAGTTCCGTTCGATGCGCGGCACGGAAGGGCT GTCGCAGCTGTTCGAGCTGGAGGTGGACCTGCTGAGTCCGAGCGCGGCGCTGGACCTGAAGTCGGTGCTGGGCAAGCCGC TGTCGCTGGAGATCCGCACGGCGGGTGCGCGGCCGCGGTTCCTGAACGGGCAGGTGGTGCGCTTCTCGATGGTGGGGCGC GAGGGCGGCACGTCGCGCTACACGGTGTACCGCGCGAGCGTTCGGCCGTGGCTGTGGTACCTCATGCGCTCGAGCGACAA CAAGATCTTCCAGAACAAGAGCGTGGTGGAGATCCTGGAGGAGGTGCTGGGCGACTACGGCTTCGCGTTCGAGAAGAAGC TGGGCGGCAGCTATCGCACGTGGGAGTACTGCGTGCAGTACAACGAGAGCGACTTCGCGTTCGTGAGCCGGCTGATGGAG CTGGAAGGCATCTACTACTGGTTCAGGCATGAGAAGGGCCAGCACACGCTGGTGCTGGCCGACGATGCGGGTGCGCACGA GCCGATGCCGGACTACGAGACCATCGACTACTTCGCGGCCGACCGGGACATCGGCGAGGACCTGGAGGTCATCCGCGACT GGCAGCCCGGCGAGGAGGTGCGCTCGGGCAGCTACACGGTGGACGACTTCAACTTCACCACGCCCAAGGGCGACCTGGTG AACGTTCGCAGCCAACCGCGCGCGCACGACAACGCCGGCTACGAGATGTACGAGTGGCTGGGGGACTACCCGGCCGCGGG CGACGGCGAGCACTATGCGCGGGTGCGGCTGGAAGAGTCGCAGGCGCTGGCGCAACGCAGCGCCGGATCTTCGACGGTGC GCGGCATGGCGCCGGGGTACACGTTCAGGATGCGCAACTCGCCGCGCTCGGACGACAACCAAGAGTACCTGGTGGTGGCG GTGTCGTATGCGCTGCGCGAAGGCGGTTATGCGAGCGGGGCGGCCAGGGGCGAATACAACTTCGACTTCATGGTGCAGCC CAGCGCGCTGGCGTTCAGGGCGCCGCGGCAAACGCCGGTGCCGCGCACGAGCGGGCCGCAGACGGCGACGGTGGTGGGGC CCGAGGGCGAGGAGATCTGGACCGACGAGTACGGACGTGTGAAGGTGCAGTTCCACTGGGACCGCTACGGCCAGAAGAAC GAGAACAGCTCGCGCTTCGTGCGGGTGTCGCACATCTGGGCCGGGGAGCGCTTCGGGGGCGTGTTCACGCCGCGCATCGG CCAGGAGGTGGTGGTGGACTTCATCGGCGGGCGAGTCGACCGGCCGGTGATCGTGGGGCGGGTGTACAACGCGGACCAGA TGCCGCCGTTCGCGTTGCCGGGCGAGGCGACCAAGAGCGGCATCGTGACGCGCTCGAGCAAGGGCGGCTCGGGCGCGAAC GCGAACGCCTTCGTGTTCGAGGACAAGATGGGCGCCGAGCAGATCCTGCTGCACGCCGAGCGCAACCTGGACGTGGAGGT GGAAGGCGACGAGACGCACACGACCGACAAGACGCGCACCACGCTGATCAAGGGGCACGAGTCGGCGACCTACGAGTCGG GGGAAGAGCGGCACATCACCGCCGGGGCGGTGGAGACGATCGACGGGGGCGAGGAGCGCACGGTGACGGGCGGCGCGACC GAGACGGTGACGGGCGGCGAGGAACGCACGATCACGGGCGGAGCGACCGAAACCATCATCGGCGGGGAGACGCGCACGGT CACCGGCGGCCTGATCGAGACAGTCAATGGCGGCGTGACACTGACAGTGAACGGCACCGTGGTGCGGATCCTCAGTGGCA CCGAAATCCGGATCGTCGGCGCAGGGCGTATCGAGATCATCAACGCGATCGATACCAAGGTGGTGAATGGAACGAACGTC ACCACCGTGACCGGCCCCAAGATCGTGTTCGCGCCATTCATCATCCACTACGCCGACACCTACACGATCAACACCGTCAA CTACATCGTCAACGCCAAGGTGGTGATCCACAACAAGCCCACGCAGACGCTCCACATCCAGGAGCACAGCCACTGGCGTT GGACGCGCTACGACATCGAAGTGTGGCAGGGCGGTACGCACGGCATGGCGTTCGACATCTACGGCATGAAGCTGATGGTG AGCAGGTGGTTCCTGTCCGCCAATGGCATCTTCGTCAACCTCGCCGCGAAGACCGAGATCCAGACGATGAACAAGTACCA GGTCGGCTGGTTGAAGTTCCGGCAGTTCATCGACGACCGAAAGACCCACGGAATGAGGGCGGTCAAGGGAACGATCTTTG TCAAGGTAAATTGA Protein sequence : MARVVTAHTPLGEEQLKFRSMRGTEGLSQLFELEVDLLSPSAALDLKSVLGKPLSLEIRTAGARPRFLNGQVVRFSMVGR EGGTSRYTVYRASVRPWLWYLMRSSDNKIFQNKSVVEILEEVLGDYGFAFEKKLGGSYRTWEYCVQYNESDFAFVSRLME LEGIYYWFRHEKGQHTLVLADDAGAHEPMPDYETIDYFAADRDIGEDLEVIRDWQPGEEVRSGSYTVDDFNFTTPKGDLV NVRSQPRAHDNAGYEMYEWLGDYPAAGDGEHYARVRLEESQALAQRSAGSSTVRGMAPGYTFRMRNSPRSDDNQEYLVVA VSYALREGGYASGAARGEYNFDFMVQPSALAFRAPRQTPVPRTSGPQTATVVGPEGEEIWTDEYGRVKVQFHWDRYGQKN ENSSRFVRVSHIWAGERFGGVFTPRIGQEVVVDFIGGRVDRPVIVGRVYNADQMPPFALPGEATKSGIVTRSSKGGSGAN ANAFVFEDKMGAEQILLHAERNLDVEVEGDETHTTDKTRTTLIKGHESATYESGEERHITAGAVETIDGGEERTVTGGAT ETVTGGEERTITGGATETIIGGETRTVTGGLIETVNGGVTLTVNGTVVRILSGTEIRIVGAGRIEIINAIDTKVVNGTNV TTVTGPKIVFAPFIIHYADTYTINTVNYIVNAKVVIHNKPTQTLHIQEHSHWRWTRYDIEVWQGGTHGMAFDIYGMKLMV SRWFLSANGIFVNLAAKTEIQTMNKYQVGWLKFRQFIDDRKTHGMRAVKGTIFVKVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 7e-95 | 42 |
