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Name : Varpa_2908 (Varpa_2908) Accession : YP_004155210.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : type VI secretion system vgr family protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 3131556 - 3133886 bp Length : 2331 bp Strand : + Note : TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: vap:Vapar_0201 type VI secretion system Vgr family protein DNA sequence : ATGACCAGGATCGTGAAGGCGCATACGCCACTGGGTGAAGAGCAGCTGAAGTTCCGTTCGATGCGCGGCACGGAAGGGCT GTCGCAGCTGTTCGAGCTGGAGGTGGACCTGCTGAGTCCGAGCGCGGCGCTGGACCTGAAGTCGGTGCTGGGCAAGCCGC TGTCGCTGGAGATCCGCACGGCGGGTGCGCGGCCGCGGTTCCTGAACGGGCAGGTGGTGCGCTTCTCGATGGTGGGGCGC GAGGGCGGCACGTCGCGCCACACGGTGTACCGCGCGAGCGTTCGGCCGTGGCTGTGGTACCTCATGCGCTCGAGCGACAA CAAGATCTTCCAGAACAAGAGCGTGGTGGAGATCCTGGAGGAGGTGCTGGGCGACTACGGCTTCGCGTTCGAGAAGAAGC TGGGCGGCAGCTACCGCACGTGGGAGTACTGCGTGCAGTACAACGAGAGCGACTTCGCGTTCGTGAGCCGGCTGATGGAG CTGGAAGGCATCTACTACTGGTTCAGGCATGAGAAGGGCCAGCACACGCTGGTGCTGGCCGACGATGCGGGTGCGCACGA GCCGATGCCGGACTACGAGACCATCGACTACTTCGCGGCCGACCGTGACATCGGCGAGGACCTGGAGGTCATCCGCGACT GGCAGCCCGGCGAGGAGGTGCGCTCGGGCAGCTACACGGTGGACGACTTCAACTTCACCACGCCCAAGGGCGACCTGGTG AACGTTCGCAGCCAACCGCGCGCGCACGACAACGCCGGCTACGAGATGTACGAGTGGCTGGGGGACTACCCGGCCGCGGG CGACGGCGAGCACTATGCGCGGGTGCGGCTGGAAGAGTCGCAGGCGCTGGCGCAACGCAGCGCCGGATCTTCGACGGTGC GCGGCATGGCGCCGGGGTACACGTTCAGGATGCGCAACTCGCCGCGCTCGGACGACAACCAAGAGTACCTGGTGGTGGCG GTGTCGTATGCGCTGCGCGAAGGCGGTTATGCGAGCGGGGCGGCCAGGGGCGAATACAACTTCGACTTCATGGTGCAGCC CAGCGCGCTGGCGTTCAGGGCGCCGCGGCAAACGCCGGTGCCGCGCACGAGCGGGCCGCAGACGGCGACGGTGGTGGGGC CCGAGGGCGAGGAGATCTGGACCGACGAGTACGGACGTGTGAAGGTGCAGTTCCACTGGGACCGCTACGGCCAGAAGAAC GAGAACAGCTCGCGCTTCGTGCGGGTGTCGCACATCTGGGCCGGGGAGCGCTTCGGGGGCGTGTTCACGCCGCGCATCGG CCAGGAGGTGGTGGTGGACTTCATCGGCGGGCGAGTCGACCGGCCGGTGATCGTGGGGCGGGTGTACAACGCGGACCAGA TGCCGCCGTTCGCGTTGCCGGGCGAGGCGACCAAGAGCGGCATCGTGACGCGCTCGAGCAAGGGCGGCTCGGGCGCGAAC GCGAACGCCTTCGTGTTCGAGGACAAGATGGGCGCCGAGCAGATCCTGCTGCACGCCGAGCGCAACCTGGACGTGGAGGT GGAAGGCGACGAGACGCACACGACCGACAAGACGCGCAGCACGCTGATCAAGGGGCACGAGTCGGCGACCTACGAGTCGG GGGAAGAGCGGCACATCACCGCCGGGGCGGTGGAGACGATCGACGGGGGCGAGGAGCGCACGGTGACGGGCGGCGCGACC GAGACGGTGACGGGCGGCGAGGAACGCACGATCACGGGCGGAGCGACCGAGACCATCACCGGCGGGGAGACGCGCACGGT CACCGGCGGCCTGACCGAGACGGTCAATGGCGGCGTGACACTGACGGTCAACGGCAACAGCATCCGGCTGCTGAGCGGCT CGGATCTGCGCATCACCTGCAGCGGGCGCATCGAGACGGTCAATGCGATGGACATCAAGCAGGTGAACGGGACCGACTGC ACCATGGTCACCGGCCCGAAGATCGTGGTCGCGCCGCTGATCACCTATCACACGACGCAGCACATCGACACCACGAGCAC CTACACGATCGACGCGACGGTGAGCATCACCAGATCGCCCCACACGATCCTCAACGTGTCCGACGAGACGTGGCTCAAGT GCAATTTCCTGCGGTGGTCCAACCAGACCGTGCGGGCGCTCGTTCTCGCGACCGATTTCTATGGGATGAAGCTGCAGGCC TGCGCGATCAACACGCAGATCAACGGCTGGTTCACCAACAGGGCGACGACCTTCCTGCTCGACGCGCCGATCAAGTTCGA GACCTCGGCGCGCAGTTCGAAGAAGAAGGGACTGAACATCGGCGTTTGCAAGCTGCACCTGTCGTGCGTCTACATGACGA AGAAGAAATGA Protein sequence : MTRIVKAHTPLGEEQLKFRSMRGTEGLSQLFELEVDLLSPSAALDLKSVLGKPLSLEIRTAGARPRFLNGQVVRFSMVGR EGGTSRHTVYRASVRPWLWYLMRSSDNKIFQNKSVVEILEEVLGDYGFAFEKKLGGSYRTWEYCVQYNESDFAFVSRLME LEGIYYWFRHEKGQHTLVLADDAGAHEPMPDYETIDYFAADRDIGEDLEVIRDWQPGEEVRSGSYTVDDFNFTTPKGDLV NVRSQPRAHDNAGYEMYEWLGDYPAAGDGEHYARVRLEESQALAQRSAGSSTVRGMAPGYTFRMRNSPRSDDNQEYLVVA VSYALREGGYASGAARGEYNFDFMVQPSALAFRAPRQTPVPRTSGPQTATVVGPEGEEIWTDEYGRVKVQFHWDRYGQKN ENSSRFVRVSHIWAGERFGGVFTPRIGQEVVVDFIGGRVDRPVIVGRVYNADQMPPFALPGEATKSGIVTRSSKGGSGAN ANAFVFEDKMGAEQILLHAERNLDVEVEGDETHTTDKTRSTLIKGHESATYESGEERHITAGAVETIDGGEERTVTGGAT ETVTGGEERTITGGATETITGGETRTVTGGLTETVNGGVTLTVNGNSIRLLSGSDLRITCSGRIETVNAMDIKQVNGTDC TMVTGPKIVVAPLITYHTTQHIDTTSTYTIDATVSITRSPHTILNVSDETWLKCNFLRWSNQTVRALVLATDFYGMKLQA CAINTQINGWFTNRATTFLLDAPIKFETSARSSKKKGLNIGVCKLHLSCVYMTKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 3e-98 | 42 |
