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Name : Varpa_3267 (Varpa_3267) Accession : YP_004155563.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3520 EC number : - Position : 3516299 - 3517456 bp Length : 1158 bp Strand : - Note : manually curated; TIGRFAM: type VI secretion protein, VC_A0111 family; KEGG: cti:RALTA_A0603 replication/virulence associated protein; DUF1305; PFAM: protein of unknown function DUF1305 DNA sequence : GTGAGGCAATCTCCCGCGAAGCCCGCGTTGCAGGAAATGTTCACGCGATTGCGCGATGCGCCCTGGAAGTTCGGCTTCTT TGCCGTATTGAGGCGCATCGGTGCGGCTTGTTCGCCGCACCCCCCGATCGGGCTCGCCAGCCGTCCGCAGCAAGAGTCCT TTCGATTGGGACAGGTGGCGGCATTGATATTCGCGCCGCGCGAAATCGCCGGTGCGGCGCTGCCGGGCGAGCTGCAACCG GCCTTCCCAGGCGCGGCGCTGCCGCGCCCGGGAAACAATCCGGACTTACCCACGGTGCGCGTGTACGGCCTGGGTCTCCT GGGTCCCAACGGACCGCTTCCGCTGCACTACACGGAGTTGATCCGCGACCGTGTCGAGAACTACAACGACAGCACATTGG CGGACTTCCTGGACCTTTTCCACCATCGCTACCTGACGCACATGTACCGCGCATGGGCGCAGAGCCAGGCGGCGGCGGGA CTGGACCGTGCCGAGGACGAGGCCTTCAGTCGCTACGTAGCTCGCCTCACGGGGCATGACCCGCTGGAGATCCGCGACTC GGCATTGCCAACGCATGCCCGTCTCGCCGCCTCCACGCACCTGACCCGGGAGGCACGCAACCCCGACGGATTGGCTGCGA CGCTCGCCCGCTTCTTTGCCGTACCCGTGCAGCTCCAGGAGTTCGTGCTGCATTGGATTCGGATCGACGACGAAGACCAG TGCCATCTGGGGCAGGCACGCGCTTCCAGCGTCATGGCGATGGGGGCGATTGCGGGAGAGGTCGTGGCCGATCGGCAGAA CAAGTTCCGGCTGGTGATCGGTCCATTGACGCTCGACCAGTACCTGCGCTTTACCCCTCACGGGCGAGACCTCCCGTTGC TCGTCGAATGGGTGCGGGGTTTCATCGGCTACGAGTTTGTCTGGGAGGTCGAGCTGCGCCTGCGCAACGACAGCACGCCG CCCGCCCGGCTCGACGATTCGGAAAAGCTCGGATGGTCTACGTGGCTGGGCGGCTCGAAGGGCCAAGCCGCACAAGTTGT CGGCTTCACCGTGGGAATGGTGTTCGAGCCCGAGCAATACATCGGCTCGCGCCATCGCAGCGATACCCAAGCCACCCAGG TCACCCAGGCCACCCAGGCCACCCAGGCCGTTCATTGA Protein sequence : MRQSPAKPALQEMFTRLRDAPWKFGFFAVLRRIGAACSPHPPIGLASRPQQESFRLGQVAALIFAPREIAGAALPGELQP AFPGAALPRPGNNPDLPTVRVYGLGLLGPNGPLPLHYTELIRDRVENYNDSTLADFLDLFHHRYLTHMYRAWAQSQAAAG LDRAEDEAFSRYVARLTGHDPLEIRDSALPTHARLAASTHLTREARNPDGLAATLARFFAVPVQLQEFVLHWIRIDDEDQ CHLGQARASSVMAMGAIAGEVVADRQNKFRLVIGPLTLDQYLRFTPHGRDLPLLVEWVRGFIGYEFVWEVELRLRNDSTP PARLDDSEKLGWSTWLGGSKGQAAQVVGFTVGMVFEPEQYIGSRHRSDTQATQVTQATQATQAVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0288 | NP_454870.1 | hypothetical protein | Not tested | SPI-6 | Protein | 5e-66 | 43 |
