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Name : Varpa_3273 (Varpa_3273) Accession : YP_004155569.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : type VI secretion lipoprotein Function : - COG functional category : S : Function unknown COG ID : COG3521 EC number : - Position : 3526056 - 3526613 bp Length : 558 bp Strand : - Note : TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: rpf:Rpic12D_1676 type VI secretion lipoprotein, VC_A0113 family DNA sequence : ATGTCATTCAATGTGCCTTGTCCCCGGCGAACCGCCTCACGGCAATGGCTTTTCGTGGTGCTCTCGTTGCTCGTTCTGGC GCTCGCACTGGCCACGGCGCAGCCCTCGCATGCCCAGTTCTCCTACCCGCGAGAGCAGACAAAGCTCGATATCACGATCA CGGCGGAGGCCGGCGTCAATCCCGACGACAAGGGCCGGGCGGCGCCCATCCTGGTGCGCATCTACGAACTCAAGTCGGAA GGCGTCTTCGAAGCCGCCGACTACTTTTCGCTCTCCAGCAATGACAAGGCCCTGATCGGCAGCGAGCTGCTCGTTCGAGA CGAATTCATCCTGCGGCCCGGCGATGTCAAGACCATCCGCCGCAAATCGCACCCCGACCTTGCGGCCATCGGTGTCGTCG CCGGCTACCGCGATCTCGCGCAAGCCGATTGGCGAGCGGTGCAAAAGATCGATCCCGCACCGGAAGTCGCCTGGTATCGC TCGGTCCTGCCGGCGAACAAGCTCAAGTTGCAGATCGACCTTCAAGCCAAGGGCATCCAGCTCACCCCCCTCAAATAG Protein sequence : MSFNVPCPRRTASRQWLFVVLSLLVLALALATAQPSHAQFSYPREQTKLDITITAEAGVNPDDKGRAAPILVRIYELKSE GVFEAADYFSLSSNDKALIGSELLVRDEFILRPGDVKTIRRKSHPDLAAIGVVAGYRDLAQADWRAVQKIDPAPEVAWYR SVLPANKLKLQIDLQAKGIQLTPLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0303 | NP_454883.1 | probable lipoprotein | Not tested | SPI-6 | Protein | 5e-29 | 47 |
