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Name : Varpa_3743 (Varpa_3743) Accession : YP_004156038.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : DNA polymerase iii subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : 2.7.7.7 Position : 4039180 - 4039902 bp Length : 723 bp Strand : - Note : SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: vap:Vapar_2148 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III DNA sequence : ATGAGTCGCCAGATCGTCCTCGATACCGAAACCACCGGGCTTTCTGCCGAGAACGGCGATCGCGTCATCGAGCTCGGCTG CGTGGAACTGTTCGCCCGCAAGCTCACCGGCAACGACCTGCACATCTACTTCAACCCCGAGCGCGAGAGCCATGAAGACG CGCTCAAGGTGCACGGCCTGACGACCGATTTTCTGCGCGACAAGCCGAAGTTCGCCACGCTCGCCAACGACATCATCGAG TACCTGCGTGGCGCTGAGCTGATCATCCACAACGCGGCGTTCGACGTGGGGTTCCTCAATAAGGAATTCGAGCGCGCGGG CCTGCCGCCGCTGCGCACCTTCGTTGCCGAAGTGACGGACACGCTGGCCATGGCGAAGCTGGTGTATCCCGGCAAGCGGA ACTCACTCGACGCCTTGTGCGACCGCTTTGGCGTTGACCGCTCGAACCGCACTTTTCACGGCGCGAAGCTAGACGCGCAA CTGCTGGCCGACGTCTACATCAATCTCACGCGCGGGCAGGATGCGCTGCTGATCGACGTGGCATCGAACGAGCCCGCGCA GGGCACCACGGTGGTGGCGATCGACCTGAGCCAGTTCGAGCTGCCGGTGATCGCGGCGGGCGAACAGGAGCTGGCTGCGC ACGAGGCGGTGTTGTCGCAGCTCGACAAATCCAGCGGCGGCCGCACGCTGTTTCGCCAAAACGGCGGAAATGCTGTGGCA TAA Protein sequence : MSRQIVLDTETTGLSAENGDRVIELGCVELFARKLTGNDLHIYFNPERESHEDALKVHGLTTDFLRDKPKFATLANDIIE YLRGAELIIHNAAFDVGFLNKEFERAGLPPLRTFVAEVTDTLAMAKLVYPGKRNSLDALCDRFGVDRSNRTFHGAKLDAQ LLADVYINLTRGQDALLIDVASNEPAQGTTVVAIDLSQFELPVIAAGEQELAAHEAVLSQLDKSSGGRTLFRQNGGNAVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 3e-47 | 45 |
