Gene Information

Name : Varpa_3748 (Varpa_3748)
Accession : YP_004156043.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : fes cluster assembly scaffold iscu
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0822
EC number : -
Position : 4043112 - 4043531 bp
Length : 420 bp
Strand : -
Note : KEGG: vap:Vapar_2143 FeS cluster assembly scaffold IscU; TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein

DNA sequence :
ATGGCATATTCTTCCAAGGTCATCGACCACTACGAAAATCCACGCAACGTCGGCTCCTTCGAAAAGGGCGACGATTCGGT
GGGCACCGGCATGGTCGGCGCACCGGCCTGCGGCGACGTGATGAAGCTGCAGATCAAGGTCAACCCCGAAACGGGCGTGA
TCGAAGACGCGCGCTTCAAGACCTACGGCTGCGGCTCGGCCATTGCCTCGTCCTCGCTCGTGACCGAATGGGTCAAGGGC
AAGACGCTCGACGAAGCGGCGGCACTCAAGAACGCGCAGATCGCCGAAGAACTGGCGCTGCCGCCGGTCAAGATCCACTG
CTCGATCCTCGCGGAAGACGCCATCAAGGCGGCCGTGAGCGACTACAAGGCCAAGCACGGTGCCAAGACCGCCGAGTCGG
CCGCCGAAGCTGTTCACTGA

Protein sequence :
MAYSSKVIDHYENPRNVGSFEKGDDSVGTGMVGAPACGDVMKLQIKVNPETGVIEDARFKTYGCGSAIASSSLVTEWVKG
KTLDEAAALKNAQIAEELALPPVKIHCSILAEDAIKAAVSDYKAKHGAKTAESAAEAVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iscU AAT96059.1 IscU Not tested T-PAI Protein 2e-45 82