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Name : Varpa_3749 (Varpa_3749) Accession : YP_004156044.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : cysteine desulfurase iscs Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : 2.8.1.7 Position : 4043582 - 4044802 bp Length : 1221 bp Strand : - Note : TIGRFAM: cysteine desulfurase IscS; KEGG: vap:Vapar_2142 cysteine desulfurase IscS; PFAM: aminotransferase class V DNA sequence : ATGGACGTCACTCCTCATTTCCCGATCTATCTCGATTACGGCGCGACCACGCCGGTCGACCCGCGTGTGGTCGACGCCAT GATTCCCTGGTTGCGCGAGCACTTCGGCAACCCGGCTTCGCGCAGCCATGCTTGGGGCTGGGAGGCTGAAGAGGCTGTCG AGAAGGCGCGCGGCCAGGTGGCGGCTCTGATCAATGCGGACCCCCGCGAGATTGTCTGGACCTCCGGCGCGACCGAGTCG ATCAATCTCGCGCTGAAGGGCGCAGCCCAGTTCTACAAAGGCAAGGGCAAGCACCTCATCACGCTGAAGACCGAGCACAA GGCTGTGCTCGACACCATGCGCGAACTCGAGCGCCAGGGCTTCGAAGTCACTTACCTCGACGTCGAGGAAAACGGCCTGG TCGATCTCGAGAAGTTCAAGGGAGCGATCCGTCCCGACACCATCCTCGCGAGCGTGCTCTTCGTGAACAACGAAATCGGC GTGATTCAGGACGTGGTCGCGCTTGGCAACGTCTGCCGGGAAAAAGGTGTGATCTTTCACGTCGATTCGGCGCAGGCCAC CGGCAAGGTCGACATCGACATCACGCAGTTGCCCATCGACCTGATGAGCCTCGCCTCGCACAAGACCTACGGCCCCAAAG GCATTGGCGCCTTGTATGTTCGTCGTAAGCCGCGCATTCGCCTCGAAGCGCAAATGCACGGCGGCGGCCACGAGCGCGGC ATGCGTTCGGGCACTCTGCCCACGCACCAGATCGTCGGCATGGGCGAGGCATTCCGCATTGCCAAGCTTGAGATGAAGGA CGACATCGCCCATGCGCGCCGCCTGCAGCAGCGGTTGCTCGACGGGCTGAAGGATGTCGAGCAGGTGTTCATCAACGGCG ACCTCGAGCGCCGCGTGCCACATAACCTGAACATGAGTTTCAACTATGTCGAAGGCGAATCGCTGATCATGGGCATCAAG GGCCTGGCGGTGTCGTCGGGATCGGCCTGCACGTCGGCCAGCCTGGAACCCAGCTATGTGCTGCGCGCCCTCGGCCGCAG CGACGAGCTGGCTCACAGCAGCCTTCGCATGACCATCGGCCGTTTCACAACCGAAGAAGAAATCGACTACGCCATCTCGA CCATCAAGCACAACGTCGCGAAGCTGCGCGAGCTGAGCCCCCTTTGGGAGATGTTCCAGGACGGTGTCGACATCAGCACG ATCCAGTGGTCGGCCCACTGA Protein sequence : MDVTPHFPIYLDYGATTPVDPRVVDAMIPWLREHFGNPASRSHAWGWEAEEAVEKARGQVAALINADPREIVWTSGATES INLALKGAAQFYKGKGKHLITLKTEHKAVLDTMRELERQGFEVTYLDVEENGLVDLEKFKGAIRPDTILASVLFVNNEIG VIQDVVALGNVCREKGVIFHVDSAQATGKVDIDITQLPIDLMSLASHKTYGPKGIGALYVRRKPRIRLEAQMHGGGHERG MRSGTLPTHQIVGMGEAFRIAKLEMKDDIAHARRLQQRLLDGLKDVEQVFINGDLERRVPHNLNMSFNYVEGESLIMGIK GLAVSSGSACTSASLEPSYVLRALGRSDELAHSSLRMTIGRFTTEEEIDYAISTIKHNVAKLRELSPLWEMFQDGVDIST IQWSAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 5e-137 | 69 |
