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Name : Varpa_4101 (Varpa_4101) Accession : YP_004156383.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : TrmH family RNA methyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 4426262 - 4427005 bp Length : 744 bp Strand : - Note : KEGG: vap:Vapar_3565 RNA methyltransferase, TrmH family, group 1; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) DNA sequence : ATGCGCACCCGTTTCATCCTGATCCAAACCAGCCACGCCGGCAACGTGGGCGCCGCCGCCCGCGCCATGAAAACCATGGG TTTCGACGACCTCGTGCTGGTGGCGCCGCGCTGGGCCAACGTGCTGCGGCGGGAAGAAACCATCCAGCGCGCGAGCGGCG CGCTCGACGTGCTGACCAACGCCCGCATCGTCGAGACGCTCGACGAAGCGCTCGACGGCGTGACCCATCTGTGCGCCACG GCCATGATCCCGCGCGACTTCGGTCCGCCGACGCGCACGCCCCGGGAGCACCTGGAGCCGCTGGCGAAAGAGGGCGATGC GCAGCACGTCGCCTTCCTGTTCGGCTCCGAGCGTTTCGGCATGCGCAATGAAGACGTCTACCGCTGCAACGTCGCCCTGA GCATTCCCACCGACCCGAAATTCGGCTCGCTCAACCTGGGCGCGGCCATCCAAGTGGTGGCCTATGAATGGCGGCTGGCG CTCGGCGGCTACGAGGTACGCGATGCCACGGCGCCCGTGCAGGCGGCCGATGCGCAATCGGTGGCGGGCATGCTCGATCA CTGGGAGCGCTCGCTGGTGGACATCGGTTTTCTCGACCCGGCCGCACCGAAGAAGCTGATGCCGCGGCTGCAGCAGCTGT TCAACCGGGCCCAGCCGACACCCGAGGAAATCCACATCCTTCGCGGCATCGCCAAGGCCATGACTGACACCGCCAAAGGC CCAAAGGGCGGCTCTTCGAGTTAA Protein sequence : MRTRFILIQTSHAGNVGAAARAMKTMGFDDLVLVAPRWANVLRREETIQRASGALDVLTNARIVETLDEALDGVTHLCAT AMIPRDFGPPTRTPREHLEPLAKEGDAQHVAFLFGSERFGMRNEDVYRCNVALSIPTDPKFGSLNLGAAIQVVAYEWRLA LGGYEVRDATAPVQAADAQSVAGMLDHWERSLVDIGFLDPAAPKKLMPRLQQLFNRAQPTPEEIHILRGIAKAMTDTAKG PKGGSSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 8e-37 | 41 |
