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Name : Varpa_4421 (Varpa_4421) Accession : YP_004156700.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2211 EC number : - Position : 4796258 - 4797589 bp Length : 1332 bp Strand : + Note : KEGG: vap:Vapar_3837 major facilitator superfamily MFS_1 DNA sequence : ATGAGCGCAACCGACGAGAAAGCGATTCGCAGGGTGGTCATCTCCGCCCTGGTGGGCGCCACCATCGAGTGGTACGACTT CTTTTTGTACGGCGTGGTGGCCGGCATCGTGTTCAGCAAGCTGTACTTTCCGGGCAGCGACCCGGTGGTGTCGGTGCTGC TGGCCTACACCACCTTCGCGGTGGGCTTCGTCACGCGGCCTTTGGGCGGCGTGATCTTCGGCCACTTCGGCGACAAGATC GGCCGCAAGAGCATGCTCATCATCACGCTGATGATCATGGGCGTGGCCACCTTCCTCATCGGCCTCGTGCCGACCTATGC GCAGATCGGCATCGCGGCGCCCGTGCTGTTGCTGCTGCTTCGCGTGGCACAGGGCATCGGCCTTGGTGGCGAATGGGGCG GCGCGGTGCTCATGGCGTATGAATACGCGCCGAAGGACAAGCGCGGCTTCTATGCGTCGCTGCCGCAGATCGGGCTGGCC ATCGGCCTGTGTCTGGCCTCGGGCGTGGTGGCGCTGCTGTCGTCGCTGCTCACCGACGAGCAGTTCATGTCGTGGGGCTG GCGCATCGCGTTCCTGATTTCCGGCGTGATGGTGCTGGTGGGCATGTACATCCGCCTGCACGTGCAGGAAACGCCCGAGT TCGCGGCGGTGAAGGCGCGCAACGCCGAGCTGCGCATTCCATTCATGGACATGCTGCGCCGCTACCCGGGCAATGTGTTG AAGGGCATGGGCGCGCGCTACATCGACGGCGTGTTCTTCAACATCTTCGGCGTGTTCTCGATCAACTATCTCACCAGCAC CATCAAGATCAGCCGCACCGATGCGTTGCTGGGCGTGATGGCGGCAGCGGTGGTGATGATCTTCTTCATCCCCTTCTTCG GCCGCATGTCCGACAAGGTGGGACGCGGCAAGGTCTACATGTGGGGGTCGCTCATCACCGCGGTGTCGGCGTTTCCGGGC TTCTGGCTCATGACGCACAGCGGAGGCAACGTGCTGCTGGTGTGGCTCGCGATCATCGTGCCCTTCGGCATCCTGTATGC CTCGGTGTACGGGCCCGAAGCCGCCCTTTTCTGCGACCTGTTCGATGCGAAGGTGCGCTACACGGGCATCAGCTTCGTCT ACCAGTTCTCGGGCATCTTCGCCTCGGGCATCACGCCGATCATCGCGACCGCGCTGCTGAAATCAGGTGGCGGCGAGCCG TGGCAGATCTGCATGTATGTGCTGTTCGCGGGCGTGGTGTCGGCGCTGTGCGCGTGGATGATCGGGCGCAGCCCATCGCC GGCGGATGCGGTCGATACGGCGGATGCGCCCGTTGTCACCGCTTCGCGCTGA Protein sequence : MSATDEKAIRRVVISALVGATIEWYDFFLYGVVAGIVFSKLYFPGSDPVVSVLLAYTTFAVGFVTRPLGGVIFGHFGDKI GRKSMLIITLMIMGVATFLIGLVPTYAQIGIAAPVLLLLLRVAQGIGLGGEWGGAVLMAYEYAPKDKRGFYASLPQIGLA IGLCLASGVVALLSSLLTDEQFMSWGWRIAFLISGVMVLVGMYIRLHVQETPEFAAVKARNAELRIPFMDMLRRYPGNVL KGMGARYIDGVFFNIFGVFSINYLTSTIKISRTDALLGVMAAAVVMIFFIPFFGRMSDKVGRGKVYMWGSLITAVSAFPG FWLMTHSGGNVLLVWLAIIVPFGILYASVYGPEAALFCDLFDAKVRYTGISFVYQFSGIFASGITPIIATALLKSGGGEP WQICMYVLFAGVVSALCAWMIGRSPSPADAVDTADAPVVTASR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-62 | 41 |
