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Name : Varpa_5638 (Varpa_5638) Accession : YP_004157902.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : amp nucleosidase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0775 EC number : 3.2.2.4 Position : 6125203 - 6126720 bp Length : 1518 bp Strand : + Note : TIGRFAM: AMP nucleosidase; KEGG: vap:Vapar_4957 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1 DNA sequence : ATGCCCTACATGCCCACATTCGTCGCCCCCGCCCGCTTCACCGACGCCGCCGCCGCACTCGAACAGGTCAAAGCCATCTA CCAGGGCGGACTCGCCCATCTGCGCGAGTCGATGCTGCGCTTCGTGGCCGGGGAGGCGCTGCCGGGCCGGGTGCGGGCCT GCTATCCGTTCGTGCGGGTGCACACGCACACGGTTTCGCGTCACACGCCGCCAGCCAATGCGGGCCTGAGCTACGGCTTC GTCGCCGGGCCGGGCCGCTACGAGACCACGCTGACGCGGCCCGATCTCTTCTCGCGCTACTACCTCGACCAGTTCCGCCT GCTGCTGGAGAACCACCAGGTGGAGCTCGAGGTCGGCACCAGCACGCAGCCGATTCCGATTCACTTCTCGTTCGCCGAGA ACGACCACATCGAAGGCACGATGAGCGAGGACCGCCGCGCGCTGATGCGCGACGTGTTCGACCTGCCCGACCTGGGCGTG ATGGACGACGGCATCGCCAACGGCACCTACGAGGCGCGGGACGGCGAGGCGCAGCCGCTGTCGCTCTTCACGGCCGCGCG GGTCGACTACTCGCTGCACCGCCTGCGCCACTACACCGGCACCGCGCCCGAGTGGTTCCAGAACTTCGTGCTGTTCACCA ACTACCAGTTCTACATCGACGAGTTCGTGCGCCTGGGCCACGAAGCGATGGCCGACGAGAACAGCGAATACATCGCCTTC ATCGAACCGGGCAACGTGGTCACGCGCCGGCGCGGGCTGGATGCGGGCGCGAGCGCCACCTTCGGCCACCTGCTCGATGG CAGCCAGGGCACGGCACCGCCGCGGCTGCCGCAGATGCCGGCCTACCACCTGGTGCGCGAGGACTACAGCGGCATCACGA TGACCAACATCGGCGTCGGCCCCGCCAATGCCAAGACCATCACCGACCACATCGCCGTGCTGCGCCCGCACGCCTGGATG ATGCTGGGCCACTGCGCGGGGCTGCGCAACACGCAGCAATTGGGCGACTACGTGCTGGCGCATGCCTATGTGCGCGAGGA CCATGTGCTCGATGAAGAGCTGCCGCTGTGGGTGCCGATTCCGGCGCTGTCGGAGATCCAGCTCGCGCTGGAGAAAGCCG TGGCCGACATCACGCGCTACGAAGGCCCGGACCTCAAGAAGATCATGCGCACCGGCACCGTGGCGAGCACCGACAACCGC AACTGGGAGCTTTTGCCCGGCAACCAGCCGCAGCGCCGCTTCAGCCAGAGCCGCGCGGTGGCGCTCGACATGGAGAGCGC GACCATCGCGGCCAACGGCTTCCGCTTCCGCGTGCCCTACGGCACTTTGTTGTGCGTGAGCGACAAACCACTGCACGGCG AGATCAAGCTGCCCGGCATGGCCAACCACTTCTATCGCGAGCGGGTGGAGCAGCATCTGCGCATCGGCATGCGGGCCATC GACATCCTTCGGGAAGAGGGCTCGAGCCGGCTGCACAGCCGCAAGCTGCGCAGCTTCGCGGAGGTCGCTTTCCAGTAA Protein sequence : MPYMPTFVAPARFTDAAAALEQVKAIYQGGLAHLRESMLRFVAGEALPGRVRACYPFVRVHTHTVSRHTPPANAGLSYGF VAGPGRYETTLTRPDLFSRYYLDQFRLLLENHQVELEVGTSTQPIPIHFSFAENDHIEGTMSEDRRALMRDVFDLPDLGV MDDGIANGTYEARDGEAQPLSLFTAARVDYSLHRLRHYTGTAPEWFQNFVLFTNYQFYIDEFVRLGHEAMADENSEYIAF IEPGNVVTRRRGLDAGASATFGHLLDGSQGTAPPRLPQMPAYHLVREDYSGITMTNIGVGPANAKTITDHIAVLRPHAWM MLGHCAGLRNTQQLGDYVLAHAYVREDHVLDEELPLWVPIPALSEIQLALEKAVADITRYEGPDLKKIMRTGTVASTDNR NWELLPGNQPQRRFSQSRAVALDMESATIAANGFRFRVPYGTLLCVSDKPLHGEIKLPGMANHFYRERVEQHLRIGMRAI DILREEGSSRLHSRKLRSFAEVAFQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| amn | YP_853085.1 | AMP nucleosidase | Not tested | PAI IV APEC-O1 | Protein | 1e-94 | 47 |
