|
Name : Varpa_5790 (Varpa_5790) Accession : YP_004158053.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : 2.4.2.29 Position : 6297682 - 6298854 bp Length : 1173 bp Strand : + Note : TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: vap:Vapar_5071 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase DNA sequence : ATGCTGAACTTCGAACTCCTCAAGACCGACCCCGACAGCCACGCGCGCCGCGCCACGCTCACGCTCAACCACGGCAAGGT GCAGACGCCGATCTTCATGCCCGTGGGCACCTACGGCACGGTCAAGGGCGTGATGCCGCGCAGTCTGGAAGAGATGGGCG CGCAGATCATCCTGGGCAACACCTTCCACCTCTGGATGCGCCCCGGCCTCGACGTGATGCAAAGCTTCGGCGGGCTGCAC CAGTTCGAGAAGTGGAACAAGCCCATCCTCACCGACTCCGGCGGCTTCCAGGTGTGGTCGCTGGGTGCGATGCGCAAGAT CAGCGAAGAGGGCGTGAAGTTCGCCTCGCCCGTCAACGGCGACAAGCTGTTCCTCACGCCCGAGGTCTCGATGCAGATCC AGACCACGCTCAACAGCGACATCGTGATGCAGTTCGACGAGTGCACGCCCTACGACACCAAGGGCCACATCACGACCGAG GCCGAGGCGCGTACCTCGATGGAGCTGAGCCTGCGCTGGGCCAAGCGCTGCCAGAGCGAATTCGCGCGGCTCGAGAACCC GAACGCGCTCTTCGGCATCGTGCAGGGCGGCATGTTCGAGAACCTGCGCGAGGAGTCGCTCGCGGCGCTGGTCGACATGG ACTTCCCCGGCTACGCCATCGGCGGCGTGAGCGTGGGCGAGCCGAAGGAAGAAATGCTGCACATCATGGGCCACACGCCG CACCGGCTGCCCGCGAACAAGCCGCGCTACCTGATGGGCGTGGGCACGCCCGAAGACCTGGTGCAGGGCGTGGCCGACGG CGTGGACATGTTCGACTGCGTGATGCCCACGCGCAACGCGCGCAACGGCACCATGTTCACCCGCTTCGGCGACCTGAAGA TGCGCAACGCCCGCCACAAAAGCGACCCGCAGCCGGTGGACCCGAGCTGCACCTGCCATGCCTGCGCGGGCACGTCAGGC GTGTCGTGGAACGACGGCGGGCGCGAAGGCTTCAGCCGCGCCTACCTGCACCACCTGGACCGCTGCGGCGAAATGCTCGG GCCGATGCTGTGCACCATCCACAACCTGCACTACTACCTGAACCTGATGACCGAGATTCGCGCGGCGCTCGACGCGGGCA CGTTCACGGAATTCCGCGCACGGTTCAAGGCCGAGCGCGCGCGCGGCGTCTAG Protein sequence : MLNFELLKTDPDSHARRATLTLNHGKVQTPIFMPVGTYGTVKGVMPRSLEEMGAQIILGNTFHLWMRPGLDVMQSFGGLH QFEKWNKPILTDSGGFQVWSLGAMRKISEEGVKFASPVNGDKLFLTPEVSMQIQTTLNSDIVMQFDECTPYDTKGHITTE AEARTSMELSLRWAKRCQSEFARLENPNALFGIVQGGMFENLREESLAALVDMDFPGYAIGGVSVGEPKEEMLHIMGHTP HRLPANKPRYLMGVGTPEDLVQGVADGVDMFDCVMPTRNARNGTMFTRFGDLKMRNARHKSDPQPVDPSCTCHACAGTSG VSWNDGGREGFSRAYLHHLDRCGEMLGPMLCTIHNLHYYLNLMTEIRAALDAGTFTEFRARFKAERARGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 7e-107 | 62 |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 7e-107 | 62 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 7e-107 | 62 |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 5e-107 | 62 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 5e-107 | 62 |
