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Name : Varpa_5839 (Varpa_5839) Accession : YP_004158102.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : protein-export membrane protein secf Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 6344452 - 6345411 bp Length : 960 bp Strand : - Note : KEGG: vap:Vapar_5118 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein DNA sequence : ATGGAATTCTTCCGGATCCACAAGACCATCCCGTTCATGCGCCACGCGCTGGTGCTGAACATCGTTTCCTTCGTCACCTT CGCGCTGGCCGTGTTCTTCCTGTTCCACCGCGGGCTGCACCTGTCGGTGGAGTTCACGGGCGGCACGGTGATGGAAGTGG CCTACAAGCAATCGGCCGACGTCGGCAAGGTGCGCGAAGTCGTCGCCAAGCTGGGCTACCAGGAGGTGCAGGTGCAGAGC TTCGGCACCTCGGTGCAGATCCGCCTGCCGGTCGCCAAGGGCATGACCTCGACCCAGCAGAGCGACCAGGTGATGGGCGC CCTGAAGGCCATCGAGCCGACGGTGGAACTGCGCAGCAACGAATTCGTCGGCCCGCAGGTGGGCGACGAGCTCACCAGCA ACGGCCTGAAGGCGCTCGCCATGGTGGTCGTGGGCATCATGATCTACCTGGCGTTTCGCTTCGAATGGAAGTTTGCGCTG GCTACCGTTCTGGCCAACCTGCACGACGTGGTGATCATCCTGGGCTTCTTCGCCTTCTTCCAGTGGGAGTTCTCGCTGGC GGTGCTGGCGGCGGTGCTGGCGGTGCTGGGCTACTCGGTGAACGAATCGGTCGTGATCTTCGACCGGGTGCGCGAGAACT TCCGCCGCTACCGCAAGATGACGACGGCCGAAGTCATCGACAGCGCGATCACCTCGACCATCAGCCGCACGATCATCACC CACGGCTCCACGCAGCTGGTGGTGCTGTCGATGTTCTTCTTCGGCGGCCCGACGCTGCATTACTTCGCCCTGGCGCTGAC CATCGGCATTTGCTTTGGCATCTACTCCTCGTGCTTCGTGGCAGCGGCCATCGCGATGTGGCTGGGCGTGAAGCGCGAAG ACCTGATCAAGGGCGGCGGCCCGCCGACCAAGCGCGAAGGCGAGACGGAAGAAGACCCGAACGCCGGCGCCGTGGTCTGA Protein sequence : MEFFRIHKTIPFMRHALVLNIVSFVTFALAVFFLFHRGLHLSVEFTGGTVMEVAYKQSADVGKVREVVAKLGYQEVQVQS FGTSVQIRLPVAKGMTSTQQSDQVMGALKAIEPTVELRSNEFVGPQVGDELTSNGLKALAMVVVGIMIYLAFRFEWKFAL ATVLANLHDVVIILGFFAFFQWEFSLAVLAAVLAVLGYSVNESVVIFDRVRENFRRYRKMTTAEVIDSAITSTISRTIIT HGSTQLVVLSMFFFGGPTLHYFALALTIGICFGIYSSCFVAAAIAMWLGVKREDLIKGGGPPTKREGETEEDPNAGAVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 2e-45 | 44 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 9e-46 | 44 |
