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Name : Varpa_5890 (Varpa_5890) Accession : YP_004158153.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Virulence Product : tonb-dependent siderophore receptor Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4772 EC number : - Position : 6410479 - 6412641 bp Length : 2163 bp Strand : + Note : KEGG: vap:Vapar_5169 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug DNA sequence : TTGTTCCCGCACAAACGCACCGCCATCGCGATGGCCCTGTTGCCCCTGAGCCTGCAGAGCTTCGCAGCCGACGCAGAACC TGCCGCCGACCCGTCGAAGTCGCTGGACACCATCACCGTCACCGGCGACTGGCTCGCCAGCCCCAACGAAACCAAGGTGC TCGAGCACGCCGGTGCGCGCAGCATCGTCGAGCGCAGGCAAATCCAGGAAAGCGGCGCCTCCAGCGTGCGCGACGTGCTG CGCCAGATTCCGGGCGTGCAGGTGCAGGAGAGCAACGGCACCGGCGGCAGCGACATCTCGCTGAACGTGGGCGTGCGCGG CCTGACCGCCCGGCTGTCGCCGCGCTCGACCATCCTGCTGGACGGCGTGCCGCTGGCCTATGCGCCCTACGGCCAGCCGC AACTGTCGCTGGCGCCGCTGTCGCTCGGCAGCATCGAGACGGTCGACGTGGTGCGCGGCGCGGGCTCGGTGCGCTATGGC CCCCAGAACGTGGGCGGCATCATCAACTTCGTGACGCGCGCGATCCCCAAGCAGTTCTCGGGTGAAGTCGGCGTGGGCAT CGAAGGCGCCGGCCACGGCGGCGGCACCAAGACCACGCCCACGCTGTTCGTCGGGGGCACCAACGACAAGGGCCTGGGCC TCGCGCTCTTGTATTCGGGCACGCACGGCGACGGCTTTCGCCAGAGCAACGACCACACCAGCATCGACGACCTGATGCTC AAGGGCGCCTACCGCATCTCGAACACCGACGACATCGCCATTTCGCTGCACCACTTCGAAGGCAAGGGCCGCATGCCGGG CGGGCTGACCACCGCGCAATTCGCGGCGAACCCGTTCCAGTCGGCCCGCCCCTTCGACGAATTCACCGGCAGCCGCACCG ACGGCTCGATCAAGTACACGCACAACGATGGCGTGAACAAGTTCGAGATGCTGGGCTACTACACCGACTCGTTCCGCAGC AGCTACCTGGAGCAGGAAGGCACCGGCACCAACGCCGGCAAGCGCCGCCTGACCAGCTCGCCGCGCAACTACAAGACCTT CGCCATCGAGCCCCGGTATTCGCGCCTCTTCGATTCGGGCAGCGTGGTGCAGGAAGTCAGCGTCGGTTTCCGGTACCTGC GCGAACAAGCCTCCGAGGTGGCAACGCGCACGGTCTACTACACGCCCTCGCCTCTGGAAAACGCCTACAACCGCACCCAG TCCCCCTTCCAGACCAGCAAGGGCGGCACCGTCGCCCACGCGTTCTACATCGACGACCGCATCGACTTCGGCAACTGGAC GGTCACGCCCGGCGTGCGCTACGAATCCTTCAGCTCGCACAACGACGTGTTCACCGTGGCGAACAACCGCATCACGACCG CGATCTACCCGAAGATCGATTCCAACGAAGTGCTGCCGACGCTCTCGGTGCTCTACCGCGCGAGCGAGCGCTGGTCGCTG TTCGCGAATGCCGGCGTGTCGTTCGGCCCGCAGCAATACGCCCAGCTCGCGCAGTCCACCACCAGCTTGCATCCCGAGAA GGCCAAGACCTACGAAATCGGCACGAAGTACAAGGGCGAAGCCTGGAGCGGCGAGCTGACGCTGTTCAACATCAACTTCG ACAAGGAGCTGCTGCTGGCGCGCTCCATCACCGGCGACGTCGGCCAGTGGACCGACCTGGGCGCCACGCGCCACCGCGGC CTGGAATCGGCGCTGCGCTACGACCTCGGCGACCTGAGCGCATCGCTCAAGGGCCTGTCGGTGTCGGGCACGTACACGTA CACGCAGGCCACCTCCAAGGCCGGCAACTTCGCCGGCCGCGACCTGCCGTTCTACTCGCGCCAGATCCTGACGCTCGGCA CGCGCTACGAGCGCGGGCCGTGGACCTTCAATGCCGACATCTACGCGCAGTCCAAGCAGCGCTCGCCGGGCTCGCCGGAA GACGGCAAGCCGTACATCACGCTCGAAGATTCGAACGGCCGCTTCGGCAACATCCCGGGCTACAGCACCGTGAACCTGCG CGCGGCCTACGACTTCGGCCCGTCGATGAGCAACCTGAAGCTGGCCGTCGGCATCAAGAACCTGTTCGATCGCCGCTACT ACAACCGCTCGGTGGACAACAACGGCGGCAAGTACGTCGGCCAGCCGCGCACGCTGTACCTGCAGGCGTCGGTGGCGTTC TGA Protein sequence : MFPHKRTAIAMALLPLSLQSFAADAEPAADPSKSLDTITVTGDWLASPNETKVLEHAGARSIVERRQIQESGASSVRDVL RQIPGVQVQESNGTGGSDISLNVGVRGLTARLSPRSTILLDGVPLAYAPYGQPQLSLAPLSLGSIETVDVVRGAGSVRYG PQNVGGIINFVTRAIPKQFSGEVGVGIEGAGHGGGTKTTPTLFVGGTNDKGLGLALLYSGTHGDGFRQSNDHTSIDDLML KGAYRISNTDDIAISLHHFEGKGRMPGGLTTAQFAANPFQSARPFDEFTGSRTDGSIKYTHNDGVNKFEMLGYYTDSFRS SYLEQEGTGTNAGKRRLTSSPRNYKTFAIEPRYSRLFDSGSVVQEVSVGFRYLREQASEVATRTVYYTPSPLENAYNRTQ SPFQTSKGGTVAHAFYIDDRIDFGNWTVTPGVRYESFSSHNDVFTVANNRITTAIYPKIDSNEVLPTLSVLYRASERWSL FANAGVSFGPQQYAQLAQSTTSLHPEKAKTYEIGTKYKGEAWSGELTLFNINFDKELLLARSITGDVGQWTDLGATRHRG LESALRYDLGDLSASLKGLSVSGTYTYTQATSKAGNFAGRDLPFYSRQILTLGTRYERGPWTFNADIYAQSKQRSPGSPE DGKPYITLEDSNGRFGNIPGYSTVNLRAAYDFGPSMSNLKLAVGIKNLFDRRYYNRSVDNNGGKYVGQPRTLYLQASVAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fecA | AAL08456.2 | FecA | Not tested | SRL | Protein | 5e-137 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_5890 | YP_004158153.1 | tonb-dependent siderophore receptor | VFG1047 | Protein | 3e-137 | 44 |
