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Name : Varpa_0066 (Varpa_0066) Accession : YP_004152400.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : LysR family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG0583 EC number : - Position : 65348 - 66292 bp Length : 945 bp Strand : - Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_0061 transcriptional regulator LysR family DNA sequence : ATGAACTTCCAACAACTGCGCTCGGTACGCGAGGCCGTTCGTTGCGGCTTCAACCTGACCGAAGTCGCTCACACCCTTCA CACCTCGCAGCCCGGCGTGAGCCGGCAGATCCGCGAACTCGAGGAAGAACTCGGCATCGAGCTCTTCGTGCGCGCCGGCA AGCGGCTCACCGGCCTCACCGAGCCGGGCGGCCATGTGCTGCCGATCATCGAGCGCATGCTGCTGGAGAGCAGCAACCTG CGGCACGCGGGGCAGGAGTTCGTTGCGCAGCAAAGCGGGCTGCTCTCCATCGCGGCCACGCACTCGCAGGCGCGCTATGC GATGCCGGTGGCGGTACAGGAATTTCGCGCGCAATTCCCGAACGTGAAACTGCACCTGCACCAGGGCTCGCCCAAGCAGA TCGCGCAGATGCTGATCGACGGCGAGGCCGACGTGGGCATCGCCACCGAGGCGCTGGGCGACTACCCGCAACTGGTCGCC CTGCCCTGCTACCGCTGGACCCATTCGGTGATCGTGCCGCCGGGCCATCCGCTGCTCGATGCGCCGCTGTCGCTGGAGGC GCTCACGCGCTATCCGCTCATCACCTACGACACGGGTTTCACCGGCCGCTCGCGCATCGACGAGGCTTTCGAGGCGCGCG GGCTGCAGCCCAACATCGTGCTCGCCGCGATGGACGCCGACGTGATCAAGACCTACGTGACGTTGGGCCTGGGCGTGGGC ATCGTGGCCGGCGTGGCGTACGAAGCGGAGCGCGACACGCAGTTGCGCGCGATCGATGCGGGGCGCCTGTTCGGCATCAA CCTCACCAAGCTCGCGGTGCGCCGCGGCAACTACCTGCGCAAGTACGTCTACGCCTTCATCGAGTCGTTCGCGCCGACCC TGACGCGCGCCATCGTCGAGAAGGCTTTGGGCGACGAAGCCAAGGCTTCCCACTACGAAATCTAG Protein sequence : MNFQQLRSVREAVRCGFNLTEVAHTLHTSQPGVSRQIRELEEELGIELFVRAGKRLTGLTEPGGHVLPIIERMLLESSNL RHAGQEFVAQQSGLLSIAATHSQARYAMPVAVQEFRAQFPNVKLHLHQGSPKQIAQMLIDGEADVGIATEALGDYPQLVA LPCYRWTHSVIVPPGHPLLDAPLSLEALTRYPLITYDTGFTGRSRIDEAFEARGLQPNIVLAAMDADVIKTYVTLGLGVG IVAGVAYEAERDTQLRAIDAGRLFGINLTKLAVRRGNYLRKYVYAFIESFAPTLTRAIVEKALGDEAKASHYEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cbl | YP_853089.1 | transcriptional regulator Cbl | Not tested | PAI IV APEC-O1 | Protein | 5e-66 | 51 |
