Gene Information

Name : VVMO6_00849 (VVMO6_00849)
Accession : YP_004188074.1
Strain :
Genome accession: NC_014965
Putative virulence/resistance : Unknown
Product : cytochrome c heme lyase subunit CcmF
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 940263 - 942245 bp
Length : 1983 bp
Strand : +
Note : -

DNA sequence :
ATGATTGCTGAAATCGGTCACTTTGCCCTCATCGTCTCACTGGCGATGGCGGTATTATTGAGCTTACTGCCCCTGTGGGG
AGCCTCAAACAACAACACCATGTTAATGAACAGTGCACGTCCGCTCTCTTGGGCAATGTTCATCATGCTGTTTATCTCTT
TCATCGTGCTGAGTTACGGCTTCTATGCCAATGACTTCACGTTGCAATACGTCGCAAGCAACTCAAATAGTCAGTTACCT
TGGTATTATCGCCTTACCGCGGTGTGGGGTGCGCATGAAGGTTCGTTGCTGCTATGGGTGCTTATCCAAGCCGCATGGAC
GGTTGCGGTGGCCACATTCAGCCGCGGCATGCCACAAGAATCTGTAGCGCGAGTACTTGCTGTGATGGGGATGATTTCAG
TTGGCTTCCTGCTGTTTATTATCGTTACTTCAAACCCATTCTTGCGTACGTTGCCATTCTTCCCAGTCGATGGTCGTGAT
CTAAACCCACTGTTGCAAGACCCAGGTTTGATTGTTCACCCACCTATGCTCTACATGGGTTACGTTGGTTTCTCCGTAGC
ATTCTCTTTTGCGATTGCCTCGCTGATGACAGGTCGTCTTGATACTGCGTGGGCTCGTTGGTCTCGCCCGTGGACAACCG
CTGCATGGGTTTTCCTGACATTAGGTATTGCACTTGGCTCTTGGTGGGCATACTACGAGCTTGGCTGGGGTGGTTGGTGG
TTCTGGGATCCAGTAGAAAACGCCTCTTTCATGCCTTGGCTTGCGGGTACGGCGCTAATGCACTCACTTGCGGTTACTGA
AAAACGCGGCACGTTTAAAGCCTGGACAGTGCTATTGGCCATCTCTGCGTTCTCATTAAGCTTGTTGGGTACTTTCTTAG
TCCGTTCAGGAATCTTGGTGTCGGTGCACGCGTTTGCATCCGATCCTTCTCGCGGCATGTTTATTCTTGGTTTCCTCGTC
TTTGTGATTGGTGGTTCGTTGCTGCTGTTTGCTGTTAAAGGTGCAGCGGTGCGCGTGCGTGGTAATTTTGACTTGGTTTC
TCGAGAGAATGCGCTACTGGCAAACAATGTACTGTTGATTGCCGCCTTAGTGGTTGTGTTGGTGGGTACGCTTTTACCAT
TAGTGCACAAGCAAATTGGTTTAGGCTCGGTTTCTATCGGCGCACCTTTCTTCGACATGCTATTTGCGTGGCTGATGATG
CCTTTTGCGTTCTTATTGGGTATTGGTCCTCTGATTCGTTGGAAGCGTGACCAACTTTCACACCTGATTAAACCAATGGC
CATTTCTGGTGTGCTGGCATTTGCATTAGGCTACCTATGTGTCTATCTGTTCGCGGATTTCTTCGATGTGATGGCATACA
TTGGCTGGGTGATGGCTATCTGGATCATCGCAATGCACGGCTTCGAGCTTTATGAACGTGCAACGCATCGTCATCCATTC
TTGACTGGTGTTCGTAAGCTACAACGTAGTCACTGGGCAATGATGTTGGGCCATGTTGGTCTCGCAGTGACGGTGATTGG
TATTGCGATGGTGCAAAACTACAGTATTGAACGCGACGTGCGTTTGGCGCCTGGTGAGCATTTCCAAATTCAGGGTTACG
ATTTCTATTTCTCAGGTCTTCGTGACAAAGATGGTCCGAACTACGACGGCTATATCGCAGACTTTGAAATCACTCATAAC
GGTCAGTACGTCAATACATTGCATGCAGAAAAGCGTTTTTATCGCACTGCAAAATCAATGATGACCGAGGCAGCAATTGA
CCGTGGCATCACGCGAGATCTCTATATTGCTATGGGTGAGCGCTTGGAAGATAACCGTTCTTGGGCTGTTCGTATTTACT
ACAAACCGTTTGTACGTTGGATCTGGGCAGGTTCTCTGATTATGTCGTTTGGTGGCTTGTTGGCCATGTCAGACAGGCGC
TACCGTTTCCGCAAAAGCAACAAAGCCGAGACGAAAACCAAGCTAAATGAGCAAGAGGCATAA

Protein sequence :
MIAEIGHFALIVSLAMAVLLSLLPLWGASNNNTMLMNSARPLSWAMFIMLFISFIVLSYGFYANDFTLQYVASNSNSQLP
WYYRLTAVWGAHEGSLLLWVLIQAAWTVAVATFSRGMPQESVARVLAVMGMISVGFLLFIIVTSNPFLRTLPFFPVDGRD
LNPLLQDPGLIVHPPMLYMGYVGFSVAFSFAIASLMTGRLDTAWARWSRPWTTAAWVFLTLGIALGSWWAYYELGWGGWW
FWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAISAFSLSLLGTFLVRSGILVSVHAFASDPSRGMFILGFLV
FVIGGSLLLFAVKGAAVRVRGNFDLVSRENALLANNVLLIAALVVVLVGTLLPLVHKQIGLGSVSIGAPFFDMLFAWLMM
PFAFLLGIGPLIRWKRDQLSHLIKPMAISGVLAFALGYLCVYLFADFFDVMAYIGWVMAIWIIAMHGFELYERATHRHPF
LTGVRKLQRSHWAMMLGHVGLAVTVIGIAMVQNYSIERDVRLAPGEHFQIQGYDFYFSGLRDKDGPNYDGYIADFEITHN
GQYVNTLHAEKRFYRTAKSMMTEAAIDRGITRDLYIAMGERLEDNRSWAVRIYYKPFVRWIWAGSLIMSFGGLLAMSDRR
YRFRKSNKAETKTKLNEQEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 4e-152 62
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 1e-135 52