Gene Information

Name : VVMO6_03950 (VVMO6_03950)
Accession : YP_004191175.1
Strain :
Genome accession: NC_014966
Putative virulence/resistance : Virulence
Product : RTX toxin transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 1133154 - 1134956 bp
Length : 1803 bp
Strand : +
Note : -

DNA sequence :
GTGGTCTCTTATCACGAACTTAACTCGACTTGGAACAAAAAGTCCCTAGAAATAAAACAAGCACAAGCTCGCTTTGACAT
CACTTGGTTCATTCCCGAATTTCTTCAGCATAAACGAGTCTTGGGTGAGATTCTGTTGTTCTCTTTTGTTCTGCAGATCC
TCGCACTTATTTCGCCCCTTTTTTTCCAAGTGGTAATGGATAAAGTGCTGGTTCACCAAGCTTGGTCAACACTGGATGTG
CTGGTGTTTGGCCTCGTGGTTACCGGGGTGATCGAAGTGGTCCTTCGTGGTCTACGTGAATATCAGTATGCCCACACGGC
CAATCGGATTGACATACAACTCGGACTAAAACTGGTTAAGCATCTGTTTGGTCTACCGTTGATGTTTTTTAAGTCCCGCC
AAGTCGGGGCGATCGTCACACGTGTACGAGAACTCGACACCGTGCGTGAGTTTTTGACTGGCTCCATGTTTACTCTAACG
GTCGAACTGCTGTTTATGTTCGTCTTCCTGTATGTAATGAGTTTACTTTCCGGCCCGCTCACTTGGCTTTTCATCGCCAC
AATACCGTGTTATGCCCTTCTTGCTTGGTGGTTAACGCCAAGAATGCAGGCGGCGATTGAAAAGCAGTTTTCACATGCTG
CGGCAAACACATCCTTTCTTACCGAAACCGTGGCAGGCAGTGAAACCCTGAAAAGTTTGGCGGTTGAGCCTCGCTTTATT
CGCCGCTGGGATGAACAAACCGAAAAAATGGTCTCAACCGGTTACGATGTCCAACAGCTCAATAATCGCTCAAACCACCT
AGTTCAATTGCTGCAAAAAATCACCAGTGTGGCGATCTTGTGGCTTGGGGCAACGGAAGTACTCTCTCTTGAAATGACCA
TCGGTCAATTGATCGCTTTCAATATGATGACCAATCACATCGCCCAGCCGCTAGCGCGTATGGTCGAATTGTGGGGGCAA
TTTATTCAAACCCGCGTCGCCGTCGAAAAACTCGGGGATATGCTCAACCTGCCAGTAGAACAACACACCGGAAGTGACAT
CGTCACACTTCAAGGGGCCGTCTCGTTTAAAAATATCCTCTTTCGTTACCAACCGGACATTCCCCCCACCATCAACGACT
TGTCATTGGACATACGAGCGGGTGAAACATTGGGCGTCGTCGGCACGTCAGGTTCAGGAAAAAGCACCTTAGCTCGCTTA
CTGTTGCGACTTTATAGTCCAGAACAAGGCAGCATCACGATTGATGGCATTCCACTCAATCACATCCACATTCAGCAATT
GAGACAACAAGTGGGTGTAGTACTACAAGAAAACTTCTTATTTAACAAAAGTGTGAGTGAGAACATCGCCCAGTCGAAGC
CGGAAGCAAGCTTAGAAGAAATTATTGAAGCGGCGAAACTCTCAGGCGCGCACGAATTCATCCTCAAGTTACCCATGGGT
TACGACACCATTTTAGCGGAAGGCGGACAATCTCTCTCTGGCGGCCAAAGGCAGCGACTCGCGATTGCACGAACACTGCT
GTCGGATCCAAAAGTGTTGATTTTGGATGAAGCCACCAGCGCCCTAGACGATGAATCTCAGGCGTTAATTCAATCCAACA
TGGCCAACATCGCCCGAGGCCGCACCGTGATCACTATCGCTCATCGCTTGTCTACCGTACGCGATTGCGATCGCATCATT
GTGCTTCATCAAGGCGCGATTGTTGAGCAAGGCTCGCATCAGCAGTTACTCACCCACGGCAAACAATACAAACAGTTATG
GCAGCTTCAGCAAGAGCTCAAACAAGAGGAAACCACCGCATGA

Protein sequence :
MVSYHELNSTWNKKSLEIKQAQARFDITWFIPEFLQHKRVLGEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDV
LVFGLVVTGVIEVVLRGLREYQYAHTANRIDIQLGLKLVKHLFGLPLMFFKSRQVGAIVTRVRELDTVREFLTGSMFTLT
VELLFMFVFLYVMSLLSGPLTWLFIATIPCYALLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFI
RRWDEQTEKMVSTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQ
FIQTRVAVEKLGDMLNLPVEQHTGSDIVTLQGAVSFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARL
LLRLYSPEQGSITIDGIPLNHIHIQQLRQQVGVVLQENFLFNKSVSENIAQSKPEASLEEIIEAAKLSGAHEFILKLPMG
YDTILAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQALIQSNMANIARGRTVITIAHRLSTVRDCDRII
VLHQGAIVEQGSHQQLLTHGKQYKQLWQLQQELKQEETTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 2e-114 50
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 2e-114 50
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 2e-114 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_03950 YP_004191175.1 RTX toxin transporter VFG0907 Protein 7e-115 50
VVMO6_03950 YP_004191175.1 RTX toxin transporter VFG1557 Protein 9e-115 50
VVMO6_03950 YP_004191175.1 RTX toxin transporter VFG1501 Protein 9e-115 50
VVMO6_03950 YP_004191175.1 RTX toxin transporter VFG1269 Protein 8e-116 49
VVMO6_03950 YP_004191175.1 RTX toxin transporter VFG0841 Protein 5e-108 48