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Name : Rahaq_1034 (Rahaq_1034) Accession : YP_004211784.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : RNA methyltransferase, TrmH family, group 1 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 1104272 - 1105009 bp Length : 738 bp Strand : + Note : KEGG: yen:YE1055 SpoU family rRNA methylase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) DNA sequence : ATGCTGCCCAATATCCGCATTGTATTAGTAGAAACGTCCCACACTGGCAATATGGGCTCTACCGCCCGTGCTATGAAAAC CATGGGTTTATCAAGCCTTTATCTGGTGAATCCGCTGGTAAAACCTGACTCTCAGGCTATCTCTTTGTCTGCCGGAGCCA GTGATGTCATCGGTAACGCGACAATTGTTGATACGCTTGATGAAGCGCTGGCTGGCTGTAGTCTGGTGATCGGCACCAGC GCACGTTCCCGCACACTGCCGTGGCCGATGCTTGAACCGCGCGAGTGCGGTGAGCACAGTGCGAAAGCCGCACAAACCGC GCCGGTGGCGCTGGTGTTTGGCCGTGAACGCGTCGGGCTGACCAACGAAGAACTGCAAAAATGTAACTATCACGTGTGCA TTCCGGCAAACCCTGAATACAGCTCGCTGAATCTGGCGATGGCTGTGCAGATTATTGCCTATGAAGTACGCGTCGCACAT CTGGCCTTGCTGGAAGCGGCAAAACCGCAAATCGAATACGAAGAAACGCCGTATCCGCTGGTCGACGATCTCGAACGTTT TTATCAGCATCTGGAAAAAACCTTGCTGGAAACCGGCTTTATTCGTCAGGCACATCCGGGGCAGGTGATGAGCAAATTAC GCCGTCTGTTTACCCGTGCACGACCTGAATCTCAGGAATTAAACATCCTGCGCGGTATCCTGACGTCGATTGAAAAGACT CATAGCAACAAAGAATAA Protein sequence : MLPNIRIVLVETSHTGNMGSTARAMKTMGLSSLYLVNPLVKPDSQAISLSAGASDVIGNATIVDTLDEALAGCSLVIGTS ARSRTLPWPMLEPRECGEHSAKAAQTAPVALVFGRERVGLTNEELQKCNYHVCIPANPEYSSLNLAMAVQIIAYEVRVAH LALLEAAKPQIEYEETPYPLVDDLERFYQHLEKTLLETGFIRQAHPGQVMSKLRRLFTRARPESQELNILRGILTSIEKT HSNKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 4e-62 | 53 |
