Gene Information

Name : Rahaq_1606 (Rahaq_1606)
Accession : YP_004212355.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Resistance
Product : MATE efflux family protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0534
EC number : -
Position : 1759442 - 1760872 bp
Length : 1431 bp
Strand : -
Note : KEGG: ebi:EbC_28810 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE

DNA sequence :
TTGCAAAACGTCATCGTCTCTTTGCGCAAAGCCATCGAGCGCACGCCCTGGTATCCGAAACGGCGTTCTTACCGTACGTT
GTTCTGGCGCGAAATAACGCCCCTCGCTGTCCCTATTTTCTTCGAAAATGCCTGCGTACTGCTGATGGGCGTACTGAGTA
CTTTTCTGGTCAGCTGGCTGGGCAAGGAAGCAATGGCAGGCGTGGGTCTGGCCGACAGTTTCAATATGGTGGTGATTTCA
TTCTTCGCCGCTGTCGATCTTGGTACCACCGTCGTCGTGGCGTTCAGCCTCGGTAAACTCGACCACGAGCGCGCCCGTGC
GGCAGCACGTCAGTCACTGGCGATCATGACCGTTTTTGCCGTACTGCTGGCGATACTTCTGCAATTTTCCGGACATGTAA
TTGTCGACATGATCGCCGGCAATGCCGAGCCGGAGGTAAAAGAACTGGCGCTGTCTTACCTGCAAATGAGCAGCTGGAGC
TATCCGGCGGCAGCCATTGCCCTGATCGGTTCCGGTGCTTTGCGTGGTGCGGGTAACACCAAAATCCCGATGTTACTTAA
CGGCGGGATGAACATCCTCAATCTGGTGATCAGCAGTGTGCTGATCTATGGTTGTTTCGGCTGGCACGGTCTGGGCTTTA
TCGGTGCCGGACTGGGGCTGACCATTTCACGTTATATCGGCGCGGTGGCCGTCATTTTCGTGCTGATGATTGGTTTCAAT
CCGTCCCTGAAAATCTCGCTGAAAAGCTATTTTCTGCCGCTCAATACCAACATTCTGCGCGAAGTCTTAGGCATCGGTAT
TCCGGCCAGTATCGAATCGGTATTGTTTAACGGCGGTAAATTACTGACGCAGGTTTTTGTCGCAGGCATGGGCACCAATG
TGATTGCCGGTAACTTTATCGCCTTCTCGATTGCGGCGCTGATCAACCTGCCGGGCAACGCGCTGGGTTCTGCCTCGACC
ATTATCGTGGGAACACGTCTGGGCAAAGGGCAAATTGCCCAATCTGAGCGCCAGTTGCGCCATATTTTCTGGCTTTCCAC
CTTCGGACTGTGTGTTCTGGCCTTCCTTTCAATGCCATTTGCCGGTTTGCTGGCACGGTTTTACACCAACGAACAGGATG
TTATCGACGTCGTCAAAATCCTTATCTGGCTGAACGCCGCCTTTATGCCTTTCTGGGCTGCCTCGTGGGTATTGCCTGCG
GGCCTGAAAGGAGCGCGTGATGCCCGCTTTACCATGTACGTTTCTATGCTCGGGATGTGGGGCTGCCGTATTGTGGTGGG
CTATTTCCTCGGGATCGTCCTGGGTTTCGGCGTAGTCGGCATCTGGCTGGGAATGTTCCTCGACTGGATCGTGCGCGGCC
TGTTTTTCTACTGGCGTATGGCCAGCGGCCGCTGGTTGTGGAAATACCCGAAGGCCAAAAGGACAGCATGA

Protein sequence :
MQNVIVSLRKAIERTPWYPKRRSYRTLFWREITPLAVPIFFENACVLLMGVLSTFLVSWLGKEAMAGVGLADSFNMVVIS
FFAAVDLGTTVVVAFSLGKLDHERARAAARQSLAIMTVFAVLLAILLQFSGHVIVDMIAGNAEPEVKELALSYLQMSSWS
YPAAAIALIGSGALRGAGNTKIPMLLNGGMNILNLVISSVLIYGCFGWHGLGFIGAGLGLTISRYIGAVAVIFVLMIGFN
PSLKISLKSYFLPLNTNILREVLGIGIPASIESVLFNGGKLLTQVFVAGMGTNVIAGNFIAFSIAALINLPGNALGSAST
IIVGTRLGKGQIAQSERQLRHIFWLSTFGLCVLAFLSMPFAGLLARFYTNEQDVIDVVKILIWLNAAFMPFWAASWVLPA
GLKGARDARFTMYVSMLGMWGCRIVVGYFLGIVLGFGVVGIWLGMFLDWIVRGLFFYWRMASGRWLWKYPKAKRTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeO YP_853088.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-134 74

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_1606 YP_004212355.1 MATE efflux family protein BAC0146 Protein 9e-149 79