Gene Information

Name : Rahaq_1673 (Rahaq_1673)
Accession : YP_004212418.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 1824344 - 1825270 bp
Length : 927 bp
Strand : +
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3129 nitrogen assimilation transcriptional regulator

DNA sequence :
ATGAATCTCAGACGTCTGAAATACTTTGTGAAAATCGTCGATATTGGCAGCCTGACACAGGCCGCTGATGTTCTGCATAT
CGCCCAACCGGCATTAAGCCAGCAACTGGCGACACTGGAAGGGGAATTGCAGCAACAATTGCTGATTCGCACCAAGCGCG
GCGTCACTCCTACCGAAGCAGGTAATATTCTTTATTCCCACGCCCAGGCCATTTTGCGCCAGTGCGACCAAATCCACAGT
GCCGTGAATAACGCCGGACAATCGCTCAGCGGACAGGTTTCTGTCGGCCTTGCGCCGGGCACTGCCGCCTCCGGGCTGGC
GTTGCCGTTGCTACAGGCTGTCCGCAAGCAGCACCCGGGCATTCTGCTGTATCTCAACGAGAATTTCGGCACTGCGCTGG
GCGATTTAGTGCTCAACGGGCGCATGGATATGGCGGTCTTTTATGGCACCAGCGTGGCCTCAGGGTTGAGCAGTCAGCCG
CTGATGAAAGAAGATTTGTATCTGGTCGGCGCGCATTCTGTGCCGAATCCGGGTAAATATGTCGAACTGGCTGAGGTGGC
AAAACTAAACCTGTTCATGCCGCGTTCCCACAATGTCACCCGCCGTCTGGTGGATGATGCGATGGCGTTGCGCCGTTTAA
GTGCCAATATCATTGGTGAAATTGAATCTTCCGCCACGCTGACTGCCGCCGTTGCCAGCGGTCTGGGGGCGACTATTTTG
CCTGAATCCGCTGCCCGCACCATGACGGGTCCGGCTAAAGCCTGGATGTCATGCATCAGCAGTCCGGCGATTCAGGTTCC
GCTTTCGCTGTGTGTTTGTGAAACGCTGGCGTTATCGCAGGAAGCCATGGCGGTGAAGAAGATCCTGCTGTCTCTGGTTT
TCGAACAGACGGCTCCGGTGGCAGAGCCGATGTTAGTGGCGAGTTAA

Protein sequence :
MNLRRLKYFVKIVDIGSLTQAADVLHIAQPALSQQLATLEGELQQQLLIRTKRGVTPTEAGNILYSHAQAILRQCDQIHS
AVNNAGQSLSGQVSVGLAPGTAASGLALPLLQAVRKQHPGILLYLNENFGTALGDLVLNGRMDMAVFYGTSVASGLSSQP
LMKEDLYLVGAHSVPNPGKYVELAEVAKLNLFMPRSHNVTRRLVDDAMALRRLSANIIGEIESSATLTAAVASGLGATIL
PESAARTMTGPAKAWMSCISSPAIQVPLSLCVCETLALSQEAMAVKKILLSLVFEQTAPVAEPMLVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nac YP_853090.1 nitrogen assimilation transcriptional regulator Not tested PAI IV APEC-O1 Protein 2e-81 60