Gene Information

Name : Rahaq_1960 (Rahaq_1960)
Accession : YP_004212703.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : ErfK/YbiS/YcfS/YnhG family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1376
EC number : -
Position : 2125720 - 2126742 bp
Length : 1023 bp
Strand : -
Note : PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; KEGG: etr:ETAE_3093 ErfK/YbiS/YcfS/YnhG family protein

DNA sequence : 
GTGCTATGTGCAAGTACACTATTCCTCCGGCCGGTTTCTATCGGATCGGGGGGAATCAACATCCTGACAACTGCCAGTGT
GGCATTAACGACCAACGAAAATATGAAAATGAGCATTCGCGCAATCCTTACCCTGGTTTTGGCAGTTGCTGCATATAGCC
AGGCGTCTTTTGCTGTGGTCTACCCTCTTCCGGCCAATAATGGTCGTCTGGTCGGTGAAAACATCACAGTTACTGTTCCG
CAGGGCAGCAGCCTGCCACTGGAACATTTTGCAGCGCAATACCAGATGGGTTTGAGCAACATGCTCGAAGCTAACCCTGG
CGTTGACCCGTACCTGCCAACCCCGGGCACCGTGCTGACCATTCCTCAGCAGTTGATCCTGCCGGAAACCCCGCACGAAG
GCATCGTGATCAACAGTGCTGAAATGCGTCTGTATTACTACCCGAAAGGCACCAATACTGTGGTCGTGCTGCCGATCGGT
ATCGGTGAACTGGGCAAAGACACCCCGATGAACTGGGTGACTACCGTTCAGCGTAAAAAAGCCGGTCCGACCTGGACCCC
GACGGCGAAAATGCATGAAGAATATGCTTCTCGTGGCGAATTCCTGCCAGCCGTCTTCCCTGCGGGTCCGGACAACCCGA
TGGGGCTGTACGCGCTGTATGTCGGGCGTCTGTATGCAGTCCACGGCACCAACGCCAATTTCGGTATCGGTTTGCGTGTG
AGCCACGGTTGTGTGCGTCTGCGTGATGCTGACATCAAATGGTTGTTCGACAACGTCCCGCAAGGCACCCGCGTTCAGTT
CATCAACGAGCCGGTGAAAGCCACCGTGGAACCAGACGGCAAACGTTATATTGAGATCCACAACCCGCTGTCCTCTAACC
AGGAAGAGTTTGATTCTCAGCAGCCGCTGCCAATCACTCTGGCAGGCAGCGCAAGCAGCGTATCGATGGATCCGGCGGTC
AACCAGACTGTTGTTCAGCGCGCTATCGAGATGCGTTCCGGTATGCCGGTACAGATCAACTAA

Protein sequence : 
MLCASTLFLRPVSIGSGGINILTTASVALTTNENMKMSIRAILTLVLAVAAYSQASFAVVYPLPANNGRLVGENITVTVP
QGSSLPLEHFAAQYQMGLSNMLEANPGVDPYLPTPGTVLTIPQQLILPETPHEGIVINSAEMRLYYYPKGTNTVVVLPIG
IGELGKDTPMNWVTTVQRKKAGPTWTPTAKMHEEYASRGEFLPAVFPAGPDNPMGLYALYVGRLYAVHGTNANFGIGLRV
SHGCVRLRDADIKWLFDNVPQGTRVQFINEPVKATVEPDGKRYIEIHNPLSSNQEEFDSQQPLPITLAGSASSVSMDPAV
NQTVVQRAIEMRSGMPVQIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-88 63