Gene Information

Name : Rahaq_2245 (Rahaq_2245)
Accession : YP_004212982.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2451987 - 2452940 bp
Length : 954 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2917 transcriptional regulator CysB-like protein

DNA sequence :
GTGAACTTTCAACAACTCAAAATTATACGGGAATCAGCGCGATGCAATTACAACCTGACCGAAGTATCGAACATGCTGTT
CACGTCGCAGTCAGGTGTCAGCCGTCATATCCGCGAGCTGGAAGATGAGCTGGGCGTTGAGATATTTATCCGTCGTGGAA
AGCGCTTACTGGGGCTGACTGAGCCGGGTAAAGAGTTGCTGGCAGTGGCCGAGAGAATTCTCAATGAGGCGCAGAATATC
CGCCGTCTTGCGGATGTTTTCTCTAAAGAAGATGCGGGCGTGCTGACCATCGCCACCACTCACACTCAGGCGCGTTACAG
TTTGCCTAAAGTCATCAAAGCCTTCCGTGCAATTTATCCGGGTGTACGCCTCGAGTTGCATCAGGGCTCGCCACAGGAAG
TGCTGACAATGCTGCTGAGCGGGCAGGCGGATGTCGCCATCGCCAGCGAAAAGCTGATGAATGATCCGTCAGTCGCCGCG
TTTCCTTATTACCGCTGGCATCACGCAATTGTCGTACCGCAAGGGCATCCGCTGACGTTGCAACACCCGCTGACGTTACA
ACATCTGAGCGAACAACCGCTGATCACCTATCGTCAGGGTATCACTGGCCGTTCCCGTCTCGATGAAGCTTTCAGCCGTG
CCGCGCTGACCGCCGATATCGTGCTGAGTGCGCAGGATTCTGATGTGATTAAAACCTACGTCGAGCTGGGATTGGGCGTG
GGCATCCTGGCAGATAAGGCATTTGAAGCCGCCCGTGATACCGGCCTGCAGTTGATCAATGCCGAGCATTTATTTGAAGC
CAATACGGTCTGGCTGGGACTGAAGAAAGCGCAATTGCAGAGAAACTACGTATGGCGGTTTATTGAGTTGTGTAATCCGG
GTCTTTCTGTGAATGAGATCAAAGAGAAGGTATTTGCGACGGGCGGGGAGCCGGTGATTGACTATCAGATCTGA

Protein sequence :
MNFQQLKIIRESARCNYNLTEVSNMLFTSQSGVSRHIRELEDELGVEIFIRRGKRLLGLTEPGKELLAVAERILNEAQNI
RRLADVFSKEDAGVLTIATTHTQARYSLPKVIKAFRAIYPGVRLELHQGSPQEVLTMLLSGQADVAIASEKLMNDPSVAA
FPYYRWHHAIVVPQGHPLTLQHPLTLQHLSEQPLITYRQGITGRSRLDEAFSRAALTADIVLSAQDSDVIKTYVELGLGV
GILADKAFEAARDTGLQLINAEHLFEANTVWLGLKKAQLQRNYVWRFIELCNPGLSVNEIKEKVFATGGEPVIDYQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 1e-105 70