Gene Information

Name : Rahaq_2465 (Rahaq_2465)
Accession : YP_004213199.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 2710293 - 2711045 bp
Length : 753 bp
Strand : -
Note : KEGG: spe:Spro_2934 amino-acid ABC transporter ATP-binding protein YecC; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase

DNA sequence :
ATGAGTACCATTGACGTAAAGCAACTGACAAAAAAATTCCACGGACAAACGGTGTTGCACGGTATCGATTTACAGGTCAA
CGCCGGCGAAGTGGTAGCGATCATCGGGCCAAGCGGTTCGGGTAAAACCACCTTGCTGCGCAGCATTAACCTGCTGGAAG
AGCCGGACGGCGGTACCATAAAAGTCGGCAATATCGAAATTGATGCCAGCAAACCGCTCAGTAAACAGAAGAATAACGTT
CGTGAGCTGCGCAAGCAGGTGGGGTTTGTTTTCCAGAACTTCAACCTGTTCCCGCACCGTTCAGTCCTGGAAAATATCAT
CGAAGGACCGGTGATTGTGAAGGGCGAGTCAAAAGAAAAAGCCATCGCCACAGCACGTCAGCTTCTGGAAAAAGTCGGGT
TAAGCGGCAAAGAAAATGCCTATCCGCGACGTCTCTCCGGTGGCCAGCAGCAACGCGTTGCCATCGCCCGCGCACTGGCG
ATGAGCCCGGAAGTGATTTTGTTTGATGAACCGACCTCCGCGCTTGACCCGGAACTGGTGGGTGAAGTGCTCAACACTAT
CCGCGCACTGGCACTTGAGCACCGCACCATGGTGATTGTGACCCACGAAATGAGTTTCGCCCGTGACGTGGCAGACCGCG
CTATTTTTATGGATCAGGGGAAAATCGTGGAGCAGGGGCCAGCGAAAGAGCTGTTTTCGAATCCGCAACATGCCAGGACG
AAACAGTTCCTGGAGAAGTTCCTGGCCCACTGA

Protein sequence :
MSTIDVKQLTKKFHGQTVLHGIDLQVNAGEVVAIIGPSGSGKTTLLRSINLLEEPDGGTIKVGNIEIDASKPLSKQKNNV
RELRKQVGFVFQNFNLFPHRSVLENIIEGPVIVKGESKEKAIATARQLLEKVGLSGKENAYPRRLSGGQQQRVAIARALA
MSPEVILFDEPTSALDPELVGEVLNTIRALALEHRTMVIVTHEMSFARDVADRAIFMDQGKIVEQGPAKELFSNPQHART
KQFLEKFLAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_2465 YP_004213199.1 ABC transporter NC_012469.1.7686878. Protein 1e-28 41