Gene Information

Name : Rahaq_2935 (Rahaq_2935)
Accession : YP_004213657.1
Strain : Rahnella sp. Y9602
Genome accession: NC_015061
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3185517 - 3186221 bp
Length : 705 bp
Strand : -
Note : TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: spe:Spro_2002 lipoprotein transporter ATP-binding subunit; SMART: AAA ATPase

DNA sequence : 
ATGAGTAATTCTTTATTATTGCAGTGTGAAAACCTCTGTAAGACTTATCAGGAAGGTAAAATGCACACCGACGTGCTGCG
TGACGTCAGTTTCGCTATGCAGCCGGGTGAGATGATGGCGATTGTCGGCACCTCCGGTTCCGGCAAAAGTACTTTGCTGC
ATTTGCTGGGCGGACTCGATTCCCCGACGTCCGGCGAAGTGATTTTCAAAGGTCAGTCTCTGAACGCGATGTCTTCATCG
GCGAAATCTGAATTGCGTAACCGCGAGCTGGGCTTCATCTATCAGTTCCACCATTTGCTGCCGGATTTCACCGCGCTGGA
AAACGTCGCGATGCCGCTGCTGATTGGCAAAAAGAAATCTGCCGAAGTGCAGGAACGCGCGCTGGCGATGCTTGAAGCGG
TGGGACTGCAACATCGCAGCAATCACCGTCCTTCCGAGCTTTCCGGTGGTGAACGTCAGCGGGTGGCAATTGCCCGTGCG
CTGGTGAATAATCCTTCGCTGGTGCTGGCCGATGAACCGACCGGTAATCTCGATCAGCGCAATGCCGACAGCATTTTCGA
ATTGCTCGGCGAACTGAATGTGCGCCAGGGCACGGCGTTTCTGGTGGTGACGCATGATCTGCAACTGGCGAACCGTCTGA
CGCGTCAGCTGGAAATGCGTGACGGCAAGTTGCAGCAGGAATCGATGTTGCTGGGAGCGAAGTAA

Protein sequence : 
MSNSLLLQCENLCKTYQEGKMHTDVLRDVSFAMQPGEMMAIVGTSGSGKSTLLHLLGGLDSPTSGEVIFKGQSLNAMSSS
AKSELRNRELGFIYQFHHLLPDFTALENVAMPLLIGKKKSAEVQERALAMLEAVGLQHRSNHRPSELSGGERQRVAIARA
LVNNPSLVLADEPTGNLDQRNADSIFELLGELNVRQGTAFLVVTHDLQLANRLTRQLEMRDGKLQQESMLLGAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rahaq_2935 YP_004213657.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 1e-37 47
Rahaq_2935 YP_004213657.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 3e-40 44
Rahaq_2935 YP_004213657.1 lipoprotein releasing system, ATP-binding protein CP001581.1.gene798.p Protein 5e-37 41