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Name : Rahaq_3382 (Rahaq_3382) Accession : YP_004214103.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3657115 - 3658929 bp Length : 1815 bp Strand : - Note : KEGG: spe:Spro_1063 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein DNA sequence : ATGTTGATCGTTGTGGTCATCGTCGGGCTGCTTTATGCACTTCCCAACCTTTATGGTGAGGATCCGGCTGTTCAAATCAC TGGTGCTCGGGGTTCCGACGCCAGTGAAGCAACGCTGGACCAAGTCCGTAACGTATTAGATCAAAGCAAAATCCAGATCA AATCAGTTGCTCTGGAGAATGGCGCTATTCTTGCCCGTTTTAACGACACGGATGTACAGCTTCGTGCACGTGAAGCGCTG ACTGAAGCGTTGGGCGACAAGTTTGTTATTGCACTGAACCTCGCGCCGGCAACGCCGCGCTGGTTGAGCATGCTGGGCGC TGAGCCGATGAAGCTGGGCCTCGACTTGCGTGGGGGTGTTCACTTCCTGATGGAAGTGGATATGGATACCGCGCTGAGTA AGCTGCAAGAGCAGACGATGGACAATATGCGCAGCGACCTGCGCGACAAGAATATTCCTTATGCCACGGTGCGTAAGCTC GACAACTATGGCGTTGAAGTGCGTTTCCGCGATGCTGCTACCCGTGATTCTGCGGTCAGCTACCTGAGCCCACGTCACCG CGATTTAGTGATCACTAACAGTGGCGACAATGCTATCCGTGTAGTGATGACTGATGCTCGCCTGAGTGAAGCCCGCGAGT ATGCCGTTCAGCAAAACATCACCATCCTGCGTAACCGTGTAAACCAACTGGGTGTGGCCGAGCCGCTGGTACAGCGTCAG GGTGCTGACCGTATCGTGGTTGAGTTACCGGGTATTCAGGATACTGCGCGCGCTAAAGAAATTTTGGGCGCGACCGCGAC ACTGGAATTCCGTCTGGTTAACACCAATGTAGATGCTTCTGCTGCTTCAACCGGTCGTGTGCCGGGCGACAGCGAAGTGA AAAACATGCGTGATGGCCGTCCGGTTGTTCTGTACAAACGCGTGATCCTGACCGGTGACCACATCACTGATTCCACATCC AGCATGGATGAGTACAATCAGCCGCAGGTTAACATCTCTCTCGACAGCGCTGGTGGTAACGCCATGTCTAACTTCACTAA GGATAACATCGGTAAACCGATGGCAACCTTGTTCGTGGAGTACAAAGACAGCGGTAAGAAAGATGCCAATGGCCGTGCGA TTCTGGCGAAGCAGGAAGAAGTTATCAACGTGGCGACCATTCAGTCACGCCTGGGTAACAGCTTCCGTATCACCGGGGTG AACGATCCGAATGAAGCCCGCCAGTTGTCCCTTCTGTTGCGCGCCGGTGCGTTGATCGCGCCAATTCAGATAGTTGAAGA GCGTACTATCGGCCCGACCTTAGGGATGCAAAACATCACTCAGGGTCTGGAAGCGTGCTTGTGGGGTCTGGTGGCATCCA TTCTGTTCATGGTGGTTTGGTACCGTAAGTTCGGCATTATCGCTACGACAGCGCTGGTCGCTAACCTGATCCTGATTGTC GGGATCATGTCTCTGCTGCCTGGTGCGACGCTGACCATGCCGGGTATTGCCGGTATCGTCCTGACGCTGGCGGTGGCCGT CGACGCCAACGTACTGATAAACGAACGTATCAAGGAAGAGCTGAAGAACGGACGTTCCGTTCAGCAGGCGATTCATGAAG GCTATAAAGGCGCGTTCTCAAGTATCGTTGATGCCAACATTACGACCCTGATCACGGCAATTATTCTTTATGCAGTGGGT ACCGGTTCGATTAAAGGCTTTGCTATCACCACCGCTATCGGTGTGGCAACCTCGATGTTTACGTCGATCGTGGGGACCCG TGCCATCGTGAACCTGGTTTACGGCGGCAAACGCATTAAAAAGCTGTCTATCTGA Protein sequence : MLIVVVIVGLLYALPNLYGEDPAVQITGARGSDASEATLDQVRNVLDQSKIQIKSVALENGAILARFNDTDVQLRAREAL TEALGDKFVIALNLAPATPRWLSMLGAEPMKLGLDLRGGVHFLMEVDMDTALSKLQEQTMDNMRSDLRDKNIPYATVRKL DNYGVEVRFRDAATRDSAVSYLSPRHRDLVITNSGDNAIRVVMTDARLSEAREYAVQQNITILRNRVNQLGVAEPLVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDASAASTGRVPGDSEVKNMRDGRPVVLYKRVILTGDHITDSTS SMDEYNQPQVNISLDSAGGNAMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILAKQEEVINVATIQSRLGNSFRITGV NDPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLWGLVASILFMVVWYRKFGIIATTALVANLILIV GIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELKNGRSVQQAIHEGYKGAFSSIVDANITTLITAIILYAVG TGSIKGFAITTAIGVATSMFTSIVGTRAIVNLVYGGKRIKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 7e-120 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 7e-120 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 7e-120 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-120 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-120 | 48 |
