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Name : Rahaq_4087 (Rahaq_4087) Accession : YP_004214802.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 4446304 - 4447710 bp Length : 1407 bp Strand : - Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: ypi:YpsIP31758_3765 replicative DNA helicase; SMART: AAA ATPase DNA sequence : ATGGCAGCAAAAAAACCGACCAATCAACAGAACGAAAACCGCGATCGCCAGATGGAAGGGTTGAAACTTCCGCCGCATTC GCTGGAAGCTGAACAATCCGTTCTGGGCGGGCTGATGCTGGATAACGAACGCTGGGATAATGTGGCCGAACGGGTGGTCA GCAATGACTTCTTCAGCCGCCCGCACCGCCTGATTTTTACCGAAATGCAGCGTTTGCTGGAAATGAGCAAACCAATCGAC CTGATCACGCTTTCCGAATCGCTGGAACAGAAAGGCGATCTGGATTCCGTCGGCGGTTTTGCGTATCTGGCAGAGCTCTC TAAAAACACCCCCAGTGCGGCGAACATCGGCGCTTACGCTGACATTGTGCGCGAACGTGCTGTTGTCCGGGAAATGATCT CCGTCGCCAATGAAATTGCCGACGCGGGCTATGATCCGCAAGGTCGCAGCAGCGAAGACCTGCTGGACTTAGCCGAATCC CGCGTATTCCAGATTGCCGAAAGCCGCGCCAGTAAAGACGAAGGTCCAAAAAGTATCGACCGTATTCTGGAAAGCACGGT CTCCCGTATCGAAGAGCTGTTCCAGCGCCCGCATGACGGCGTAACCGGCGTTTCAACCGGCTATGCTGACCTCGACAAGA AAACCGCAGGCTTGCAAAAATCCGACCTGATCATTGTGGCGGCGCGTCCGTCGATGGGTAAAACCACTTTTGCGATGAAC CTCGCAGAAAATGCCGCGATGATGCAGGATAAACCGGTCTTAATCTTCAGCCTTGAGATGCCCGGCGACCAGATCATGAT GCGTATGCTGGCGTCGCTTTCGCGCGTCGACCAGACCAAAATCCGTACCGGCCAGCTCGATGATGAAGACTGGGCACGTA TTTCCAGCACCATGGGGATTCTGCTCGAAAAACGTAACATGTATATCGATGATTCGTCCGGGCTGACGCCAACCGAAGTT CGTTCGCGTGCGCGACGTATCTTCCGTGAGCACGGCGGCCTGAGCCTGATCATGATCGACTACCTCCAGCTGATGCGCGT TCCGGCGTTGTCTGATAACCGTACGCTGGAAATTGCCGAAATCTCCCGCTCGCTCAAAGCGCTGGCGAAAGAATTGCAGG TGCCGGTGGTGGCGCTGTCGCAGCTGAACCGAAGCCTGGAGCAACGTGCGGATAAACGCCCGGTCAACTCCGACTTACGT GAATCCGGCTCCATCGAGCAGGACGCCGACTTAATCATGTTCATCTATCGTGATGAGGTCTATCACGATAACAGTGAAGA AAAAGGCATCGCGCAAATCATCCTCGGTAAACAACGTAACGGCCCGATCGGTACCGTCCGCCTGACCTTTAACGGTCAGT GGTCGCGATTTGATAACTATGGCGGCCCGCAATACGACGAAGACTAG Protein sequence : MAAKKPTNQQNENRDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVAERVVSNDFFSRPHRLIFTEMQRLLEMSKPID LITLSESLEQKGDLDSVGGFAYLAELSKNTPSAANIGAYADIVRERAVVREMISVANEIADAGYDPQGRSSEDLLDLAES RVFQIAESRASKDEGPKSIDRILESTVSRIEELFQRPHDGVTGVSTGYADLDKKTAGLQKSDLIIVAARPSMGKTTFAMN LAENAAMMQDKPVLIFSLEMPGDQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGILLEKRNMYIDDSSGLTPTEV RSRARRIFREHGGLSLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLR ESGSIEQDADLIMFIYRDEVYHDNSEEKGIAQIILGKQRNGPIGTVRLTFNGQWSRFDNYGGPQYDED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 5e-103 | 54 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-107 | 53 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 8e-107 | 53 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 4e-107 | 53 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-102 | 51 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-92 | 50 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-92 | 50 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-88 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-80 | 46 |
