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Name : Rahaq_0917 (Rahaq_0917) Accession : YP_004211669.1 Strain : Rahnella sp. Y9602 Genome accession: NC_015061 Putative virulence/resistance : Unknown Product : lytic transglycosylase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0741 EC number : - Position : 984126 - 985514 bp Length : 1389 bp Strand : - Note : KEGG: pct:PC1_3139 membrane-bound lytic murein transglycosylase D; PFAM: lytic transglycosylase catalytic; MLTD_N domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM DNA sequence : ATGAAGGCAAACGCGATCCTAATAATCGCCTCCATGTTGCTCACAGGTTGCCAGGCGTCCAGGCAGGGCGTGAAGGTACC GGAACAACATGCACAGAGTTTGTCTTCAGCAAGTCAAAGTGAAGAAGCAGGACAGTTCACAGGTGATGGCCGAGCGGCCT CTGGGGGATGGTTGGATGGAAACGACACCGTCTCCCAACAAAATCTGTGGAACTTCATAGGCGACGAGCTGAAGATGAAG GTTCCGGATAATCCCCGGATCCGCGAACAAAGAGTTAAATATTTAAAAAATAAGAGCTATCTCCACGATGTAACATTACG GGCAGAGCCGTACATGTACTGGATCACCGAGCAGATTAAGAAACGTAATATGCCGATGGAACTGGTACTGCTACCCATAG TGGAGAGCGCTTTTGACCCCAAAGCAACCTCATCAGCTAACGCTGCAGGGTTGTGGCAAATTGTGCCGCAGACGGGTCGA AACTATGGTTTGAAACAAAACCAGTGGTATGACGGACGCCGTGATGTTGTGGCTTCGACAACTGCTGCGCTTGATATGAT GCAACGTCTGAACAAGATGTTTGGTGGCGACTGGTTACTGACCGTTGCTGCGTATAACAGCGGTGAAGGCCGTGTCATGC AAGCGGTGAAAGCGAACAAAGCCAGAGGCCGTTCCACGGATTTCTGGGCACTGGCGCTGCCACGTGAAACATCGATTTAT GTGCCGAAAATGTTAGCCCTTAGCGACATTCTCAAGCACAGCAAGAAATACGGTATCAATCTGCCGAAACCGAGTGAAGA CCGTGCTCTTGCGCGTGTTGAAGTCGGACAGCAGATGCAACTGACCCAGGCGGCTGAGATGGCGGGCATGTCCCTGACCA AGCTTAAGTCGTTTAACACTGGCTACAAGAAAAATGTAACCGCGCCGAATGGCCCGCATTACATTGTTCTGCCGAAGGCG CATGCCGACCAGTTAAAAGATTCACTGGCTGATGGCGATATTGCCGCAGTACAGGAAACCAAACTGGCCAGCAACACTCC GTCAGGTGCAAAACAGTACAAGGTTCGCTCCGGCGACAGCTTGTCTGGCATTGCAGCCCGGCTGAATGTGAAGACCCGTG ATTTACAGCGTTGGAACAATTTGCGCTCAGCAGGCGCGTTAAAAGTTGGGCAAACACTGCAGGTGGCGGATAACAGCGTC AGCAATACCAGTGCCAATCGCGGCAGTATCACTTATCAGGTACGTAAAGGTGATTCATTGTCGAGCATTGCTAAGCGTCA CGGCGTCAACATCAAGGATGTGATGCGCTGGAACACCAATGCCGACAACCTGCAACCGGGCAACAAGTTAACGTTGTTCG TCAGCAACAAGATGAGTCCTGATACCTGA Protein sequence : MKANAILIIASMLLTGCQASRQGVKVPEQHAQSLSSASQSEEAGQFTGDGRAASGGWLDGNDTVSQQNLWNFIGDELKMK VPDNPRIREQRVKYLKNKSYLHDVTLRAEPYMYWITEQIKKRNMPMELVLLPIVESAFDPKATSSANAAGLWQIVPQTGR NYGLKQNQWYDGRRDVVASTTAALDMMQRLNKMFGGDWLLTVAAYNSGEGRVMQAVKANKARGRSTDFWALALPRETSIY VPKMLALSDILKHSKKYGINLPKPSEDRALARVEVGQQMQLTQAAEMAGMSLTKLKSFNTGYKKNVTAPNGPHYIVLPKA HADQLKDSLADGDIAAVQETKLASNTPSGAKQYKVRSGDSLSGIAARLNVKTRDLQRWNNLRSAGALKVGQTLQVADNSV SNTSANRGSITYQVRKGDSLSSIAKRHGVNIKDVMRWNTNADNLQPGNKLTLFVSNKMSPDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mltD | AAO17227.1 | MltD | Not tested | tcd island | Protein | 4e-130 | 60 |
