Gene Information

Name : AciX9_0648 (AciX9_0648)
Accession : YP_004216499.1
Strain : Granulicella tundricola MP5ACTX9
Genome accession: NC_015064
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 784685 - 787351 bp
Length : 2667 bp
Strand : +
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Clp domain protein; Clp ATPase-like; KEGG: aca:ACP_2407 ATP-dependent chaperone protein ClpB; SMART: ATPase AAA

DNA sequence :
ATGGCTATTCGTTGGGATCGGTTGACGGTGAAGTCGCAGGAGGCGGTACAGGCTGCGAGTGGGTTTGCTGCGGAGAACGG
TAATCCGGAGGTGCTGCCCGTGCATCTGATGGCGGCGCTGCTGGAGGATCGTGAGGGCGTGGTGATCCCCGTGCTCGAAA
AGATTGGCGTGCCGGTGGAGCAGATGCTGAGTGGGGTGAACGCGGCCATTGCGAAGCTGCCGAAGGTGCAGGGTGGGACG
CAGCCGGGGCTCTCTAATGGTATGCAGAAGGTGATCGAGCAGGCGTTCAAGGAGGCGGAGAACTTCAAGGACGAGTACTG
CTCGACCGAGCATCTGCTGCTGGCGCTGAGTGCGTCGGGAGCGGGGAGCGATACGGTTCGGTCGGCGCTGGCGGCGTTTG
GGGCGACGCATGAGGCGATCTTGAAGGCGCTAAGTGGAGTGCGGGGAAATACGCGGGTGACGGATCAGACGCCGGAGGGC
AAGTTTCAGGCGCTGGAGAAGTATGCGAAGGACCTGACGGAGTTGGCGCGGAGAGGCAAACTTGATCCCGTCATCGGCCG
CGATGAGGAGATTCGGCGGGTGGTGCAGGTGCTGAGCCGGCGGACCAAGAACAACCCGGTGCTGATTGGAGAGCCCGGAG
TGGGGAAGACTGCGATTGTGGAGGGGCTGGCTAGGAGGATCGTCTCTGGCGACGTGCCGGAGAGCTTGAAGGATAAACGG
GTGGTGGCGCTGGACCTGGCGAGCATGGTGGCTGGAGCGAAGTTCCGTGGGGAGTTTGAGGAGCGGCTGAAGGCGGTGCT
GAAGGAGATCGAGGACGCGGATGGGGAGATCATTCTGTTCATCGACGAGCTGCATACGCTGGTGGGCGCGGGGGCGGCTG
AGGGGGCGATGGATGCCTCGAACATGCTGAAGCCGGCGTTGGCGAGGGGCGGGCTGCGGGCGATCGGTGCGACGACGCTG
AATGAGTATCGGAAGTACATCGAGAAGGATGCGGCGCTGGAGCGTCGGTTCCAGGTGGTGTATGTCGGCGAGCCGAATGT
GGAGGATACGGTTGCGATTCTGCGCGGGCTGAAGGAGCGGTACGAGTCGCACCACAAGATACGGATCAAGGATTCGGCGA
TTGTGGCTGCGGCTACGCTGAGCCATCGGTATATTTCGGACCGGTTTTTGCCGGACAAGGCGATCGACCTGGTGGATGAG
GCGGCGGCTGCGCTGGCGATCCAGATTGGGAGTGTGCCGGTTGAGATCGATCAACTGGAGCGGCGGGGGACGTCGTTGGA
GATCGAGAAGCAGGCGCTGAAGCGGGAGACCGATGCTGCGAGCCGGGAGCGGATGGAGATCGTCGAACGGGAACTGGCGG
AGGTGCAGGAGACTGCGTCCGGGCTGCGGGCTCGGTGGCAGACGGAGCGGGGGGCGATTGGGAAGGTTGCGGAGCTGAAG
GGGCGGCTCGAAAGCTTGCGGTTTCAGGCGGAGGAGGAGACTCGGCGGGGGAATCTGCAGCGTGCGGCGGAGCTGCAGTA
TGGGGAGATTCCGCAGTTGGAGCGGGAGTTGAAGGGGTTGACGGAGGCTCAGGATGAGCTGGCTCGTGTCGATTCTTCCC
ATGTCTCAGATGCGAGACATGGGGCACCCCGAGCTTCTCGGATGTTGAAGGAGGAGGTGGACGAGGAGGATATTGCGGCG
ATCGTGTCGCGGTGGACCGGGATTCCTGTGTCCAAGATGCTGGAGGGTGAGGTTCAGAAGCTGGTTGAGATGGAAGCTCG
GCTGCGGGAGCGGGTGGTGGGGCAGGATGAGGCCCTCTCGGCTGTCGCGAACGCCATCAGGCGCTCGCGTGCTGGACTGT
CTGATCCGAAGCGGCCGATTGGGTCTTTTATCTTTCTGGGGCCTACGGGCGTGGGGAAGACGGAGACGGCTCGGGCGCTG
GCGGAGTTCCTGTTTGACGACGAGGCTGCGATGGTGCGGATCGATATGAGCGAATACATGGAGAAGCACGCTGTTTCGCG
GTTGATTGGCGCGCCTCCGGGGTATGTGGGGTATGACGAGGGCGGGCAGTTGACGGAGGCGGTGCGGCGGAGACCGTATG
GGGTGGTGCTGTTCGATGAGATCGAGAAGGCACATCCGGATGTGTTCAATGTGCTGCTGCAGGTGTTGGATGACGGGCGG
CTGACGGACTCGAAGGGCAGGACGGTGGACTTCAAGAACACGGTGCTGATCATGACTTCGAATATTGGCGCGGGCCAGTT
GTCGACGGCGTGGGCGGAGAACGAGGAGGGGTTTGAGGATGCGAAGGTGAGGGTGATCGACTCGCTGAAGCAGCACTTCA
GGCCGGAGTTTCTGAATCGCGTGGACGATATTGTGGTGTTCCATCCGCTGGGCGAGGAGCAGTTGGCGCACATTATCGAT
CTGCGGCTGGCTGAGCTGACGCAGATGCTGGCTGACCGGAAGATCGTGATCGAACTGACGGATGAGGCGAGGGCGGCGAT
CTTCAAAGCGGGGTATGACCGTGCGTATGGTGCCCGGCCGCTGAAGAGGGCGATTCAGCGGATGGTGCAGGATAAGCTGG
CGATCAAGATCCTCGACGGCAGCGTGCTGCATGGGGATCGGGTGGTTGTGGATGCGGGGAGGGACGGGCTTACGTTCAGC
GTTTCTGAACGAGTGGTTAGTGAGTAG

Protein sequence :
MAIRWDRLTVKSQEAVQAASGFAAENGNPEVLPVHLMAALLEDREGVVIPVLEKIGVPVEQMLSGVNAAIAKLPKVQGGT
QPGLSNGMQKVIEQAFKEAENFKDEYCSTEHLLLALSASGAGSDTVRSALAAFGATHEAILKALSGVRGNTRVTDQTPEG
KFQALEKYAKDLTELARRGKLDPVIGRDEEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSGDVPESLKDKR
VVALDLASMVAGAKFRGEFEERLKAVLKEIEDADGEIILFIDELHTLVGAGAAEGAMDASNMLKPALARGGLRAIGATTL
NEYRKYIEKDAALERRFQVVYVGEPNVEDTVAILRGLKERYESHHKIRIKDSAIVAAATLSHRYISDRFLPDKAIDLVDE
AAAALAIQIGSVPVEIDQLERRGTSLEIEKQALKRETDAASRERMEIVERELAEVQETASGLRARWQTERGAIGKVAELK
GRLESLRFQAEEETRRGNLQRAAELQYGEIPQLERELKGLTEAQDELARVDSSHVSDARHGAPRASRMLKEEVDEEDIAA
IVSRWTGIPVSKMLEGEVQKLVEMEARLRERVVGQDEALSAVANAIRRSRAGLSDPKRPIGSFIFLGPTGVGKTETARAL
AEFLFDDEAAMVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPYGVVLFDEIEKAHPDVFNVLLQVLDDGR
LTDSKGRTVDFKNTVLIMTSNIGAGQLSTAWAENEEGFEDAKVRVIDSLKQHFRPEFLNRVDDIVVFHPLGEEQLAHIID
LRLAELTQMLADRKIVIELTDEARAAIFKAGYDRAYGARPLKRAIQRMVQDKLAIKILDGSVLHGDRVVVDAGRDGLTFS
VSERVVSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-105 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 4e-108 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 3e-108 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciX9_0648 YP_004216499.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-116 42
AciX9_0648 YP_004216499.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-108 42