Gene Information

Name : BC1001_0182 (BC1001_0182)
Accession : YP_004226707.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : type VI secretion lipoprotein
Function : -
COG functional category : S : Function unknown
COG ID : COG3521
EC number : -
Position : 203985 - 204488 bp
Length : 504 bp
Strand : +
Note : TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: bxe:Bxe_A2090 outer membrane lipoprotein

DNA sequence :
ATGCGTCAAATTTTCACTGTCATTGTTCTGGCCTGCGCGTTCGCTCTCGCAGCGTGCGCAACTCACGATCCGAATGCGCC
CAAGGAGGTCATCCAGCTCGACATGCAGGTGGTGGCGTCTGCCGGCGTCAATCCGGACAACCAGAAGCGGCCGGCGCCGA
TCGTCGTGACGATTTACGAATTGAAGACCGGCTCGGCGTTCGCTGCTGCCGACTACTTCTCCCTGCAGGACAAGGACAAG
ACCGTACTCGCCGACGACCTTGTCCGGCGCGACCAGTTTCAATTGCGACCGGGCGAGAAAAAAAGCATCCAGCGGAAGAT
CGATCCAGCCAGCACGAAGCTCGGCATCCTGGCGGCCTACCGCGATTTGCCGAATTCGGTGTGGCGCGTGGTCTACACGC
TGCCCACCACGCCGGACGCAGCCTGGTACTACCGCACCCCAAAACTCAAACTGACCGTCGATCTCGATGCAAATGCGGTC
AACGTCAACGAACCCAAGCAGTGA

Protein sequence :
MRQIFTVIVLACAFALAACATHDPNAPKEVIQLDMQVVASAGVNPDNQKRPAPIVVTIYELKTGSAFAAADYFSLQDKDK
TVLADDLVRRDQFQLRPGEKKSIQRKIDPASTKLGILAAYRDLPNSVWRVVYTLPTTPDAAWYYRTPKLKLTVDLDANAV
NVNEPKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0303 NP_454883.1 probable lipoprotein Not tested SPI-6 Protein 3e-33 50