Gene Information

Name : BC1001_1861 (BC1001_1861)
Accession : YP_004228353.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2131366 - 2132292 bp
Length : 927 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1492 LysR family transcriptional regulator

DNA sequence :
ATGAATTTCCAGCAATTGCGCTTCGTGCGCGAGGCCGTGCGTCAGAACATGAACCTGACCGAAGTGGCGAACGTGCTGTA
CACATCGCAGTCGGGCGTGTCGAAACAGATCAAGGACCTCGAAGACGAACTCGGCGTCGACATCTTCATTCGACGCGGCA
AGCGGCTCACGGGCCTCACGGAGCCGGGCAAGGCGGTGCATCAGCTGATCGAGCGGATGCTGCTCGATGCTGAGAATCTG
CGCCGCGTCGCGCGTCAGTTCGCGGATCAGGACAGCGGCCACCTGGTGGTCGCGACGACGCACACGCAGGCCCGCTATGC
GCTGCCCAAGGTGATCCGCCAGTTCACCGAAGTGTTCCCGAAGGTGCACCTCGCGCTGCGCCAGGGCAGCCCGCAGCAGA
TCGCGCAGATGATCATCAACGGCGAGGCGGATATCGGCATTTCCACCGAAGCGCTCGACCGCTTCCCGGACATCGTCACC
TTCCCGTGCTATTCGTGGCATCACGTCGTGGTGGTGCCGAAGGATCATCCGCTCGTCGGCCGGCCGAATCTGACGCTCGA
CGAAATCGCCGAATTCCCGATTGTCACGTATGACCAGGACTTCACGGGCCGCTCGCACATCGACCAGGCCTTCGCGAAAG
CCGGCGCCTTGCCCGACGTGGTGCTGACCGCGATCGACGCCGACGTGATCAAAACCTACGTCGAGCTCGGCATGGGCATC
GGCGTGGTGGCGGCGATGGCCTACGACCCCAAGCGCGACAGCGAACTCGTCGCGCTCGACACGCAGCATCTGTTCGAGGC
GAGCACCACGCGGGTCGGCTTGCGCAAGGGCGCGTTTCTGCGCGCGTATGCGTACCGTCTGATCGAGATGTTCGCGCCGC
AATTGACCGAAGCGGAAATCGCCGCGCAGCTGCGCGAAGCCGTGTAA

Protein sequence :
MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLTEPGKAVHQLIERMLLDAENL
RRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTEVFPKVHLALRQGSPQQIAQMIINGEADIGISTEALDRFPDIVT
FPCYSWHHVVVVPKDHPLVGRPNLTLDEIAEFPIVTYDQDFTGRSHIDQAFAKAGALPDVVLTAIDADVIKTYVELGMGI
GVVAAMAYDPKRDSELVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPQLTEAEIAAQLREAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 7e-84 55