Gene Information

Name : BC1001_2230 (BC1001_2230)
Accession : YP_004228707.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : TrmH family RNA methyltransferase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0565
EC number : -
Position : 2531647 - 2532480 bp
Length : 834 bp
Strand : -
Note : KEGG: bgf:BC1003_1229 RNA methyltransferase, TrmH family, group 1; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU)

DNA sequence :
GTGGACCACACCCACCATTCTTCCGATCCCGCCGTGGCGGACTTGCGCGGCGGCTTCACCTCGACGCGCTTCGTACTCGT
CGAGCCGAGCCATCCGGGCAACGTCGGAGCCGCGGCGCGCGCGCTCAAAACCATGGGCTTTTCGCGGCTCGTGCTGGTTT
CGCCGCGCGTGCCGCATGTGCAGAGCGATCCCGAAGCGATCGCCATGGCAAGCGGCGCCGACGACGTCCTCGCCTCCGCG
CATATCGTGCCCACGCTCGCCGATGCGCTCTCCGGCGTGCACTGGTCGATCGCGCTCACCGCGCGGCAACGCGAATACGG
TCCGCCGCAATGGACGCCGCGCGCGGCCGCCAGCCTCGCGCGCGACGAAGCGTTGCACGGCGAAATCGCGCTCGTCTTTG
GCAACGAGCGCACGGGCTTGTCGAACGAAGACGTGGAGCGGTGCAGCGCGCTCGCGCATATTCCGGCCAATCCCGCCTAC
AGTTCGCTGAATCTCGCCCAGGCGGTTCAGGTTCTGGCGTACGAGCTGCGCATGATCTATTTGACGAGCGGCGCAAAGGC
CAATGCGCCGGCAAACCCTGCGCCCCAGGCGGCGGCGCCGGCCGAGCCGTCGGGCCCGCGCGCCGCGAGCGATGAGATCG
AAAGCATGTTCTCGCATCTCGAGCGCGCGCTCGTCGCGCTCGAATTTCTCGATCCCGCGAATCCGAAGAAGCTGATGTCG
CGCTTGCGCCGGCTCTTCGCGCGTTCGGGGCTCGAGCGCGAGGAGGTGAACATCGTGCGTGGCATCGCCAAGCACATCTT
GCTGAAGACCGGCCGCAAGGACGACGGGGCCTAA

Protein sequence :
MDHTHHSSDPAVADLRGGFTSTRFVLVEPSHPGNVGAAARALKTMGFSRLVLVSPRVPHVQSDPEAIAMASGADDVLASA
HIVPTLADALSGVHWSIALTARQREYGPPQWTPRAAASLARDEALHGEIALVFGNERTGLSNEDVERCSALAHIPANPAY
SSLNLAQAVQVLAYELRMIYLTSGAKANAPANPAPQAAAPAEPSGPRAASDEIESMFSHLERALVALEFLDPANPKKLMS
RLRRLFARSGLEREEVNIVRGIAKHILLKTGRKDDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96063.1 group 1 trmH family protein Not tested T-PAI Protein 4e-47 47