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Name : BC1001_0418 (BC1001_0418) Accession : YP_004226940.1 Strain : Genome accession: NC_015136 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 458406 - 460466 bp Length : 2061 bp Strand : - Note : KEGG: bgf:BC1003_0432 protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein DNA sequence : ATGAATCGTTACCCCCTCTGGAAATACGCCGTGATGCTGGTGGCTCTCGTCATCGGCCTCGTGTACACGCTGCCCAATCT GTTCGGCGAAGCGCCGGCGGTGCAGGTGTCGAGCGGCAAGGCAACGGTCAAGCTCGACTCGACCACGCTGTCGGCGGTCG AAACCGCGCTCGCAGCCAATCAGATCAAGCCGGAAGACGTCACGTTCGACAACTCGTCGACCAACGCGAACATTCGCGTG CGTCTTCTCGACACCGACACGCAATTGCGCGTGAAAGACCTGCTGCAGAAGTCGCTCAACAGCGACCCGAGCGACCCGCA GTTCGTCGTCGCGCTGAATCTGCAAAGTGCGTCGCCGCGCTGGCTGACCGCCTTGCACGCGCTGCCCATGTACCTCGGTC TCGACTTGCGCGGCGGCGTGCACTTCCTGCTGCAGGTCGACATGGCGGGCGCGCTCAACAAGAAGCTCGACTCCGACGCG TCGGATGCGCGCACGCTCTTGCGCGACAACAACATCCGCGACGGCGGCGTGAACCGCGTCAACCAGACGGTGGTGATCAA TTTCGCCGACCAGGCCACGGCGGACGCCGCGGCCAAGCAATTGAGCCGCAGCATCGGCGAATTGCAATGGGCGTCGCAAA ACGGCCCGGACGGTTCCGTGCAGCTCGTCGGCACCTTCACGCCGACCGTGCAGAAAGCCGTGCAGGACGCCGCGCTCAAG CAGAACATCACCACGCTGCATAACCGCGTGAACGAACTCGGCGTGGCCGAGCCGGTTATCCAGCAGCAAGGCGCCGACCG GATCGTGGTCGAATTGCCGGGCGTGCAGGACACGGCGAAGGCAAAGGACATCATCGGCCGGACGGCGACGCTCGAAGCGC GCCTCGCCGACCCGGTCAACACGCATCCGAATCCGTCCGACCCCGTGCCGCCCGGCGACGAGCTGTTCACGCAAGGCAAC CAGACGCCCGTGCTGCTGAGAAAGCAGATCATCTTCACCGGCGACCGGATTATCGACGCGTCGGCGGGCTTCGACGAACA TCAGCGCCCGTCCGTCAACATTCGCCTCGACTCGGCCGGCGGCCGCGCCGTGCGCAGCGTGTCGCGCGACAACATCGGCA AGCCGATGGCCATGGTGCTGTTCGAAAAGGGCAAGGGCGAGGTGCTGACGGTCGCGACCATCCAGTCGGAACTCGGCGAC CGCTTCCAGATTACCGGCCAGCCGACGCCGCAAGCCGCCGCCGACCTCGCGCTGCTGCTGCGCGCCGGCTCGCTCGCCGC GCCCATGGACATCATCGAGGAACGCACCATCGGCCCGAGCCTCGGCGCCGACAACATCAAGAAGGGCTTCCATTCGGTGG TGTGGGGCTTTGCGGCCATCGCCGTCTTCATGATCGCGTACTACATGCTGTTCGGCGTGATCTCCATGATCGGCCTGTCC GTGAACCTGCTGCTGCTGATCGCGGTGCTCTCCATGCTGCAGGCCACGCTGACGTTGCCGGGTATCGCGGCTATTGCGCT CGCGCTCGGTATGGCGATCGACGCAAACGTGCTGATCAACGAACGCGTGCGTGAAGAACTGCGCAACGGCGCGCCGCCGC AACTGGCCATCCAGAACGGCTACGCGCATGCCTGGGCGACCATCCTCGACTCGAACGTCACCACGCTGATCGCGGGCGTC GCGCTGCTCGCCTTCGGCTCGGGGCCGGTGCGCGGTTTCGCGATCGTGCACTGTATCGGCATTCTGACGTCGATGTTCTC GGCGGTGTTCTTCTCGCGCGGTATCGTCAATCTCTGGTACGGCGGCAAGAAGAAGCTGAAGTCGCTCGCCATCGGCCAGG TGTGGCGTCCGGAAACCGCGCCCGCGGGCTCCGCTGCCTATCTGGGCAACGACGACTCGGCAACGGACACCGCGCAGGCC ATGCGCGCAGCCAGTGCAGCCGCCGCGAAGCCGAAAGCGCCCGCGGCAGCCGCGCAATCGCGCGCCGGCAAGCCGACCGT GCGTCGCCGCAATGCCCCCGGCACGCCGGGCACGCCGCAGAAACCGGGTTCATCCCGCTGA Protein sequence : MNRYPLWKYAVMLVALVIGLVYTLPNLFGEAPAVQVSSGKATVKLDSTTLSAVETALAANQIKPEDVTFDNSSTNANIRV RLLDTDTQLRVKDLLQKSLNSDPSDPQFVVALNLQSASPRWLTALHALPMYLGLDLRGGVHFLLQVDMAGALNKKLDSDA SDARTLLRDNNIRDGGVNRVNQTVVINFADQATADAAAKQLSRSIGELQWASQNGPDGSVQLVGTFTPTVQKAVQDAALK QNITTLHNRVNELGVAEPVIQQQGADRIVVELPGVQDTAKAKDIIGRTATLEARLADPVNTHPNPSDPVPPGDELFTQGN QTPVLLRKQIIFTGDRIIDASAGFDEHQRPSVNIRLDSAGGRAVRSVSRDNIGKPMAMVLFEKGKGEVLTVATIQSELGD RFQITGQPTPQAAADLALLLRAGSLAAPMDIIEERTIGPSLGADNIKKGFHSVVWGFAAIAVFMIAYYMLFGVISMIGLS VNLLLLIAVLSMLQATLTLPGIAAIALALGMAIDANVLINERVREELRNGAPPQLAIQNGYAHAWATILDSNVTTLIAGV ALLAFGSGPVRGFAIVHCIGILTSMFSAVFFSRGIVNLWYGGKKKLKSLAIGQVWRPETAPAGSAAYLGNDDSATDTAQA MRAASAAAAKPKAPAAAAQSRAGKPTVRRRNAPGTPGTPQKPGSSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-94 | 42 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-93 | 42 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-93 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-93 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-93 | 42 |
