Gene Information

Name : BC1001_5113 (BC1001_5113)
Accession : YP_004231554.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 1709665 - 1710561 bp
Length : 897 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4374 LysR family transcriptional regulator

DNA sequence : 
ATGCGCATTCCACCCGTCAAAGCCATCATCGCGTTCGAGAGCGTGGCCCGCACCGGGAGCGTCAATCGCGCGTCGGAGGA
ACTCGGGCTGACGGCTTCCGCAGTGAGCCATCAGATCAGCAATCTCGAGTCGGTCATCGGCCAGGCGCTGTTCTATCGCT
CCGGACGCGGCCTCGTCCTGACGCCGACGGGCGAGCGCTATCTGTCGGACGTGACGGGTTCTCTCGCGGACCTGAGCCGC
GCCACCGAACGTGCGTCGAGCCGCACCGAGGTCGAAATTCTGCGCGTGCATTCGAGCCCGAGCTTCGGCCTCATGTGGCT
GCTGCCGCGGCTTGCCTCGTTTCAGGAAGCGAACGGCGACATCCAGTTGAACCTTGCCTGCTCCTACGAGGATGTGTCGT
TCACGAGCGGTTACTACGACATCGACATTCGGCACGGCTACGCGAACTGGCGCGACCTGGAAGTGCGCACGCTGCGCAAC
GAGTTCATTGCGCCGCTCGCGTCGCCCGCTTATCTGCGCAACCACCGGGTCGACACGCCGGAAGATCTGCTCGCGCATCG
GCTGATCTATTCGGAGACGCCGCTCGTGCAGTGGCAGCAATGGTTCGGGCGCACCGGCGTTTCCGCGAAGCAGAAGACGT
TCGACTTCTCTTTCGACCGCTCGTACATGTCGCTCGAAACCGCGGCGCTCGGGCTCGGCATCGCGCTCGAAAGCCTGATG
CTCGCCTCGGTTCGCATCAGGGAAGGCGCGCTCGTGCCGCTGTTCGACCAGTCGCATGCGGTCGAAGTGGGCGCGCATCA
TCTGGTTTATCCGCCGCAAAATGCGGACTTGCCGCGCGTGGCGCGGTTCATCGCGTGGATCGAACGGGAAATCGGCCAGA
AGGAGCGCGCGGCCTGA

Protein sequence : 
MRIPPVKAIIAFESVARTGSVNRASEELGLTASAVSHQISNLESVIGQALFYRSGRGLVLTPTGERYLSDVTGSLADLSR
ATERASSRTEVEILRVHSSPSFGLMWLLPRLASFQEANGDIQLNLACSYEDVSFTSGYYDIDIRHGYANWRDLEVRTLRN
EFIAPLASPAYLRNHRVDTPEDLLAHRLIYSETPLVQWQQWFGRTGVSAKQKTFDFSFDRSYMSLETAALGLGIALESLM
LASVRIREGALVPLFDQSHAVEVGAHHLVYPPQNADLPRVARFIAWIEREIGQKERAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96174.1 lysR family transcriptional regulator Not tested T-PAI Protein 4e-70 51
unnamed AAT96097.1 lysR family transcriptional regulator Not tested T-PAI Protein 4e-70 51
unnamed AAT96053.1 lysR family transcriptional regulator Not tested T-PAI Protein 4e-70 51
unnamed AAT96226.1 lysR family transcriptional regulator Not tested T-PAI Protein 4e-70 51
unnamed AAT96114.1 lysR family transcriptional regulator Not tested T-PAI Protein 5e-70 50