Gene Information

Name : BC1001_5637 (BC1001_5637)
Accession : YP_004232071.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 2289666 - 2290193 bp
Length : 528 bp
Strand : +
Note : KEGG: bpy:Bphyt_4913 type VI secretion protein, VC_A0107 family; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301

DNA sequence :
ATGGCGAAGAAAGAAAGCATACAAAAACGCTTGCAGAAAGTGCGGCCGCCCCGCGTGCAGCTCACCTATGAGGTGGAGCG
CGGCGATGCGATCGAAGTGAAGGAGCTGCCGTTCGTCGTCGGCGTGGTTGCCGATCTGGCGGGGCAGTCGGAAGTCGAAC
AGCCGAAGCTGCGCGATCGCAAGTTCGTCAACATCGACCGCGACAATTTCGACGACGTCATGAAGGCGATCGAGCCGCGC
GCTGCTTTTCAGGTGGACAACCGTCTGAGCGAAGCCGGCGGCAAATTCGCAGTCGATCTGCGTTTCAAGTCGATGGCCGA
TTTCAATCCGGACGAAGTGGTCGCGCAAATCGAGCCGCTGCGGCGTCTGCTCGAAGCGCGCTCGAAGCTTGCCGACCTGC
GCAACAAGCTGGCCGGCAACGACAAGCTGGAAGACCTGCTCTCCGAAGTGCTCAACAACACGCAGCAGCTGCAGACGCTG
GCGAAAGACCACGGCGGCGCGCCGGATCACGACAAGCAAGGCGAATAA

Protein sequence :
MAKKESIQKRLQKVRPPRVQLTYEVERGDAIEVKELPFVVGVVADLAGQSEVEQPKLRDRKFVNIDRDNFDDVMKAIEPR
AAFQVDNRLSEAGGKFAVDLRFKSMADFNPDEVVAQIEPLRRLLEARSKLADLRNKLAGNDKLEDLLSEVLNNTQQLQTL
AKDHGGAPDHDKQGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1001_5637 YP_004232071.1 type VI secretion protein VFG2069 Protein 3e-27 42