Gene Information

Name : BC1001_3675 (BC1001_3675)
Accession : YP_004230148.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Unknown
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 79246 - 80310 bp
Length : 1065 bp
Strand : -
Note : KEGG: bph:Bphy_7015 type VI secretion protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305

DNA sequence : 
ATGACCAGCCCACCGCTCGAGCCCCACCTATCGCCAACACTGCTCGAAAACCTGCATTCCACCCCATGGCGCCACGGGTT
TCTCGCGCTTCTTCGCCGGCTCAACGCGAATCTGGCCATGGCACCGATCGGAACTGCTCTGCTCCCGGAGGCGGAAAATT
TCAGGCTTGGCCAAAAGCCGAGTCTGATCTTCGCAGCCGCCGAGATTGCTGACGCGAGGGTGATCGACGGTAAGCTGCGC
ATCCGTCTGTTTGGTCTAGGCATGCTGGGGCCAAACGGCCCGTTGCCGATCCATGTCACCGAAATCGCGCGCGAGCGGGA
AGAGCTGCGGCGCGACAGCACGCTGTCCAATTTCCTCGACATCTTCCATCACCGTTCGTTGTCGCTTCTGTACCGCGCAT
GGGCCGCGGCGCAGTCGGCGGCGAGTCTGGACAGGCCGGACGATGACCGTTTTTCTTTCCATGTATCTGCGCTCGCGGGC
GTGCCGCAGCGACGCTTACGGGGGGAATCCGTTCCGACTCACGCACGCCTTGCCGCAAGCCCTCATCTCGTGCGTCATTC
GCGCAATCCAGATGGGCTGCGCAGTACGCTCACGCGCTATTTCGGCGTGCCCGTCGAAGTCAGTGAATTCGAGTTGGACT
GGATGCCCGTGGAACCGGTGAACCGATGCAGGATGGGGGAGGAAAGCACTGCAGCGACGCTCGGCGGCGAGGCGCTACTA
GGCGAGCACGTGCCGGATCGTCGCCATCGGTTTCGCGTGGTGCTGGGGCCGCTCGACCTCGGACAGTACCTTCGCTTCAC
GCCGCAGGGCAAGGAACTGCTGCCGCTGGTGGAATGGGTGCGGATATTCACACGCGGCGAGTATCGATGGCTGCTCGAAC
TGCAGCTCACGCCCGACTGCGCTGTGCCCATGGTGCTGGGCGACAATCAACAGCTCGGCTGGTCTGGCTGGCTGGGCGAG
TCACCCGATGGCAAGCCTGTCGTCGGCATGCGCTTTGAGCCTGAGATGTATGTGCTGCAGTTGCGTAGGGACGCGGCGGG
ACGGGCACAAAGCAGGGCTAGATGA

Protein sequence : 
MTSPPLEPHLSPTLLENLHSTPWRHGFLALLRRLNANLAMAPIGTALLPEAENFRLGQKPSLIFAAAEIADARVIDGKLR
IRLFGLGMLGPNGPLPIHVTEIAREREELRRDSTLSNFLDIFHHRSLSLLYRAWAAAQSAASLDRPDDDRFSFHVSALAG
VPQRRLRGESVPTHARLAASPHLVRHSRNPDGLRSTLTRYFGVPVEVSEFELDWMPVEPVNRCRMGEESTAATLGGEALL
GEHVPDRRHRFRVVLGPLDLGQYLRFTPQGKELLPLVEWVRIFTRGEYRWLLELQLTPDCAVPMVLGDNQQLGWSGWLGE
SPDGKPVVGMRFEPEMYVLQLRRDAAGRAQSRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0288 NP_454870.1 hypothetical protein Not tested SPI-6 Protein 1e-58 47