Gene Information

Name : Acav_2089 (Acav_2089)
Accession : YP_004234568.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2331374 - 2332315 bp
Length : 942 bp
Strand : -
Note : PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_1721 transcriptional regulator CysB-like protein

DNA sequence :
ATGAACCTGCACCAGTTCCGCTTCGTCCAGGAAGCCGCCCGCCGCAACCTCAACCTGACGGAAGCCGCCAAGGCGCTCCA
CACCTCGCAGCCCGGGGTGTCCAAGGCCATCATCGAACTGGAAGACGAGCTGGGCGTGGACATCTTCGCGCGCCACGGCA
AGCGGCTCAAGCGCATTACCGAGCCGGGGCAGCACGTGCTCAAGAGCATCGAGCTGATCATGCGCGAGGTGGGCAACCTC
AAGCGCATCGGCGAGCAGTTCAGCGCGCAGGACAGCGGCACGCTGAGCATCGCCACCACCCACACGCAGGCGCGCTACGT
GCTGCCGGTGCCCGTGGCGAAGCTGCGCGAGGCCTATCCCAAGGTGAACGTGAGCCTGCACCAGGCCACGCCGCACGAGG
TGGCGCGCATGGTGATCGACGAGGTGGCGGAGATCGGCATGGCGACCGAGTCGCTCGCCGACTACCCGGACCTCGTCACC
CTGCCCTGCTACGAATGGCAGCACGTGCTGGTGATGCCCTCGGGCCATCCGCTGGCGCAGCAGGAGCGCATCAGCGTGGA
CGACATCGCCCACGAAGCCCTCATCACCTACCACCCCTCGTTCACGGGGCGCGGCAAGATCGACCAGGCCTTCGCCGCGC
GCAAGCTGCAGCCGCGCATCGTGCTGGAGGCCATCGATTCGGACGTGATCAAGACCTACGTGCGCCTCGGCCTGGGCGTG
GGCATCGTGGCCGAGATGGCGATGCGCGACGACCCGCTGGGCGACCTCGTCGTGCGGCCGGTGGGCCACCTGTTCGGCCA
GAGCGTGGCGCGCGTGGCGTTCAAGCGCGGCGCCTACCTGCGCAACTTCGTCTATAAATTCGCGGAGCTGCTCAGCGACC
GGCTGAACCGCGAACTCGTGGCCCGCGCGATGACCGGGCACGTGAACGACTACGAGCTTTGA

Protein sequence :
MNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEDELGVDIFARHGKRLKRITEPGQHVLKSIELIMREVGNL
KRIGEQFSAQDSGTLSIATTHTQARYVLPVPVAKLREAYPKVNVSLHQATPHEVARMVIDEVAEIGMATESLADYPDLVT
LPCYEWQHVLVMPSGHPLAQQERISVDDIAHEALITYHPSFTGRGKIDQAFAARKLQPRIVLEAIDSDVIKTYVRLGLGV
GIVAEMAMRDDPLGDLVVRPVGHLFGQSVARVAFKRGAYLRNFVYKFAELLSDRLNRELVARAMTGHVNDYEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 3e-64 46