Gene Information

Name : Acav_0301 (Acav_0301)
Accession : YP_004232791.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 339440 - 340699 bp
Length : 1260 bp
Strand : +
Note : PFAM: Cysteine-rich domain; KEGG: dia:Dtpsy_0186 glycolate oxidase iron-sulfur subunit

DNA sequence :
ATGCAAACCCGACTCGCCCCCGAATTCCAGGACACGCCCGAAGGCCGCGAGGCCGAGGGCATCCTGCGCAAGTGCGTGCA
CTGCGGCTTCTGCACCGCCACGTGCCCGACCTACCAGTTGCTCGGCGACGAGCTGGACGGGCCGCGCGGGCGCATCTACC
TCATCAAGCAGGTGCTGGAAGGGGAGACACCCACGCGCAAGACGCAACTGCACCTGGACCGCTGCCTGACCTGCCGCAAC
TGCGAGACGACCTGCCCGAGCGGCGTGCAGTACGGGCGCCTGGTGGATATCGGCCGGCGCATCGTCGAGGACAAGGTGCC
GCGGCCGCTGCCCGAGCGCGCGCGCCGCTGGGCATTGAAGGAGGGCCTGCCTTCGCCGCTCTTCAAGCCGGCCCTGAAGG
CCGGCCAGGCCGTGCGCGGGCTGCTGCCTGCCACGCTGCGCGCCAAGGTGCCGCGCCCCCAGGAGGCCGGCGCCTGGCCG
GTGCGCGAGCACGCGCGCAAGGTGCTCATGCTCGCGGGCTGCGTGCAGCCGGCGATGCTGCCCAATGTGAACCGCGCCAC
GGCGCGCGTGCTGGACGCCGCGGGCATCCAGACCGTGATCGCCGCCGGCGAGGGCTGCTGTGGCGCGGTGAAGTTCCACC
TCAACGACCAGGACGGCGGCCTCGCGCAGATGCGCGCCAACATCGATGCCTGGTGGCCGCACGTGGAGGCGGGCGGCGTG
GAGGCGATCGTGCTCAATGCCTCGGGCTGCGGCGCAACGGTCAAGGAGTACGGCCACCTGCTGCGCCACGACCCGGCCTA
CGCCGCGCGGGCGGAGCGCGTCAGCGCGCTGGCGCGGGACCTGTCCGAGCTGCTGCCGGACATGCTGCCCGCGCTCGCCG
AGCGGCTGCAGGGGCGGATCGATCCCCCGCGCGCGCTGCTCGCCTACCACCCACCCTGCACGCTGCAGCACGGCCAGAAA
CTGCGCGGCGGGGTGGAGGCCCACCTGGCCCGCCTGGGCTTCCGCCTGCGCGTGGCGCGCACGGAGTCGCACCTGTGCTG
CGGTTCCGCCGGCACCTACTCGCTGCTGCAGCCGGAGATCGCCGGCCAGTTGCGCGACCGCAAGCTCGGCGCGCTGGACG
AGGCCTGCGCGGAGGAGCCGCCCGCGGCCATCCTCTCGGCCAATATCGGCTGCATCACGCACCTGCAGAGCGGCACCCAG
GTGCCCGTGCGGCACTGGGTGGAGGTGCTCGACGAGGCCCTGCGGCCGGGCGCCGTCTAG

Protein sequence :
MQTRLAPEFQDTPEGREAEGILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGETPTRKTQLHLDRCLTCRN
CETTCPSGVQYGRLVDIGRRIVEDKVPRPLPERARRWALKEGLPSPLFKPALKAGQAVRGLLPATLRAKVPRPQEAGAWP
VREHARKVLMLAGCVQPAMLPNVNRATARVLDAAGIQTVIAAGEGCCGAVKFHLNDQDGGLAQMRANIDAWWPHVEAGGV
EAIVLNASGCGATVKEYGHLLRHDPAYAARAERVSALARDLSELLPDMLPALAERLQGRIDPPRALLAYHPPCTLQHGQK
LRGGVEAHLARLGFRLRVARTESHLCCGSAGTYSLLQPEIAGQLRDRKLGALDEACAEEPPAAILSANIGCITHLQSGTQ
VPVRHWVEVLDEALRPGAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 2e-109 59