Gene Information

Name : Acav_0514 (Acav_0514)
Accession : YP_004233004.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Virulence
Product : type III secretion protein, HrpO family
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 562017 - 562280 bp
Length : 264 bp
Strand : -
Note : KEGG: rsl:RPSI07_mp0805 type III secretion protein HrcS; TIGRFAM: Type III secretion protein HrpO; PFAM: Bacterial export protein FliQ, family 3

DNA sequence : 
ATGAACCACGACAACATCGTCCAGCTCACCTCCGAGGCCCTCATGCTGTGCCTGCTGCTGTCGCTGCCGGCCGTGGCCGT
CGCGGCGATCGTCGGCCTGCTCGTGGCGCTGGTGCAGGCCGTCACCTCGCTGCAGGACCAGTCGATCTCGCAAGGCATCA
AGCTCATCTGCGTGACGGTCACCGTCGCCGTGAGCGCCCCCTGGGTGGGCAGCACCGTGCTGCAGTTCTCGCAACGGCTT
CTCACGGCCGTCTTCACGCCATGA

Protein sequence : 
MNHDNIVQLTSEALMLCLLLSLPAVAVAAIVGLLVALVQAVTSLQDQSISQGIKLICVTVTVAVSAPWVGSTVLQFSQRL
LTAVFTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS YP_198719.1 hypothetical protein Virulence Hrp PAI Protein 0.006 57
hrcS YP_362152.1 HrcS protein Virulence Hrp PAI Protein 0.006 57
hrcS BAB07863.1 HrcS Virulence Hrp PAI Protein 0.004 57
hrcS AAD21322.1 HrcS Virulence Hrp PAI Protein 0.004 57
hrcS AAP34350.1 HrcS Virulence Hrp PAI Protein 0.004 56
hrcS NP_640756.1 HrcS protein Virulence Hrp PAI Protein 0.006 56