Gene Information

Name : Acav_0814 (Acav_0814)
Accession : YP_004233304.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 897431 - 897946 bp
Length : 516 bp
Strand : -
Note : KEGG: neu:NE1096 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2

DNA sequence : 
ATGGCAGCCGTGGAAACGGCGCTGCAGCAGCATGTCAGTGCGCTGTATTGCGAACATCATGGATGGTTGCTGGCGTGGCT
GCGCCGCAAGCTCGGTTGCGGACACCAGGCGGCCGATGTGGCCCATGACACGTTTCTGCGCATCCTGGGCACGCCCACGG
TGCTGCCGACGCTGCGCGAGCCCCGCGCCTACCTGGTCACCACCGCCAGGCGCCTGCTGATCGACGAGGCGCGGCGCCGC
GTGATCGAGCAGGCCTACCTGGACGCGCTGGCCGTGGTGGCTGGCACCGATGGCGGACCTTCGACCGAGCAGGTGGTGGA
GACGATACAGGCGCTGGTGCGCATCGAGGCCGCGTTGCAGGACCTGTCGGCCAGGGCGCAGCAGGCTTTTCTGCTGCATT
ACCTGGAAGGGCTGCCGCATGCGGAGGTGGCGGCCGCGCTGGGCGTGTCCACCCGCATGGTGCAGAAGTACCTGGTCCAG
GCGCTGGTGTGCTGCCACCAGGCAGTGGACGGGTGA

Protein sequence : 
MAAVETALQQHVSALYCEHHGWLLAWLRRKLGCGHQAADVAHDTFLRILGTPTVLPTLREPRAYLVTTARRLLIDEARRR
VIEQAYLDALAVVAGTDGGPSTEQVVETIQALVRIEAALQDLSARAQQAFLLHYLEGLPHAEVAAALGVSTRMVQKYLVQ
ALVCCHQAVDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 7e-30 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acav_0814 YP_004233304.1 ECF subfamily RNA polymerase sigma-24 subunit VFG1049 Protein 3e-30 43